KEGG   Pseudomonas sp. RU47: CCX46_05095
Entry
CCX46_05095       CDS       T11150                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
psru  Pseudomonas sp. RU47
Pathway
psru03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:psru00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CCX46_05095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psru03019]
    CCX46_05095
   03009 Ribosome biogenesis [BR:psru03009]
    CCX46_05095
   03036 Chromosome and associated proteins [BR:psru03036]
    CCX46_05095
Enzymes [BR:psru01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     CCX46_05095
Messenger RNA biogenesis [BR:psru03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CCX46_05095
Ribosome biogenesis [BR:psru03009]
 Eukaryotic type
  90S particles
   RNase
    CCX46_05095
 Prokaryotic type
  rRNA processing factors
   CCX46_05095
Chromosome and associated proteins [BR:psru03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     CCX46_05095
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2
Other DBs
NCBI-ProteinID: AZZ74536
LinkDB
Position
1168865..1169554
AA seq 229 aa
MSVSLSRLERQLGYTFKDQELMLLALTHRSFAGRNNERLEFLGDAILNFVAGEALFDRFP
LAREGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMDMARERVLAWLAGEFEGLTLVDTNKDPKTRLQEHLQSRGCDLPRYEVVDIQG
EPHCRTFFVECEVVLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagcgtttctctaagccgtctcgagcgccagctcggttacaccttcaaggatcaggag
ctgatgctgctggccctcacgcaccgcagttttgccgggcgtaacaacgaacgcctggaa
ttcctcggcgatgccatcctcaacttcgttgccggcgaggcactgttcgatcgcttcccg
ctggcccgcgaaggccagttgtcgcgtttgcgcgcacgcttggtaaaaggtgagacgctg
gccgtactggcgcgcggtttcgaccttggcgattacctgcgactgggttccggtgagttg
aaaagcggcggcttccgtcgcgaatcgattctggccgacgccctcgaagccttgatcggt
gcgatctaccttgatgccggcatggacatggcgcgtgagcgcgtgctggcctggctggcc
ggcgagttcgaaggcctgacgctggtcgacaccaacaaggatccgaaaacccgcctgcag
gaacacctgcaatcgcgcggttgcgatctgccacgctatgaagtggtggatatccagggc
gagccgcactgccgaaccttcttcgtcgagtgcgaagttgtcttactgaatgaaaaaagc
cgaggtcagggtgtgagccgtcgtattgccgaacaggtagcggccgccgcagcactgatt
gccctgggcgtggagaatggcaatgactga

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