Pseudomonas sp. RU47: CCX46_07645
Help
Entry
CCX46_07645 CDS
T11150
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psru Pseudomonas sp. RU47
Pathway
psru00260
Glycine, serine and threonine metabolism
psru00460
Cyanoamino acid metabolism
psru00630
Glyoxylate and dicarboxylate metabolism
psru00670
One carbon pool by folate
psru00680
Methane metabolism
psru01100
Metabolic pathways
psru01110
Biosynthesis of secondary metabolites
psru01120
Microbial metabolism in diverse environments
psru01200
Carbon metabolism
psru01230
Biosynthesis of amino acids
psru01240
Biosynthesis of cofactors
psru04981
Folate transport and metabolism
Module
psru_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CCX46_07645 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CCX46_07645 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CCX46_07645 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CCX46_07645 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CCX46_07645 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CCX46_07645 (glyA)
Enzymes [BR:
psru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CCX46_07645 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AZZ75024
LinkDB
All DBs
Position
complement(1717545..1718894)
Genome browser
AA seq
449 aa
AA seq
DB search
MAFTTEPLKNQADLLRRGLADLRAEDAELAAILDAEVTRQQHTLSLISSSCAVQPRTLVA
CASVLVNVTAEGMSGKPHSAGCENVERVESLAIRRARELFAAQYANVQPHSASNAVYQVL
TALLEPGDTLLGMAVEHGGHLTHGSLAAFSGAYYKAIQYGTTSDGLIDYDKVRLLALAHR
PRVILCGATAYSRVVDFKRFREIADEAGAILLADISHIAGLVATGRHPSPIDAAHVTVTC
THKQLAGPRGGVILSGRDANTKIPGLRTTFSRLLDQAAYPRMQGAPAANMIAAKAAALGY
AMSAEFDTCMAQIRSTADEMAKAFQALDYEVVGGCSENHTVLVRLRGGITGAIAEAALGH
CGIIVSKHRVPGDPRSALVTSGLRIGTGALAQRRVDVHGSRQIVNLIGRILNTVAPLGEQ
DYTLEPLLLAQFRSEVETLCRDYPVADYV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcattcactactgaaccgctcaagaatcaggctgacttgttgcgacgtggcctggcg
gatcttcgcgcagaagatgccgaactggcggccattctcgatgctgaagtcacgcgtcaa
cagcacacgctttcgttgatctcatcttcctgcgcagtgcaaccacgaaccttggtggca
tgcgcttcagtgctggtcaacgtgacagctgaaggcatgtccggcaagcctcacagcgca
ggatgcgagaacgtcgaacgggtcgagtcgctggccatccgcagggcgcgggaactgttc
gcggcccaatacgccaacgtccagccgcactcggcgtcgaacgccgtttaccaggtgctg
acagccttgctggagccgggcgataccttgctgggcatggcagtggaacacggtggtcat
ctgacgcatggcagcctcgctgcgttttccggcgcctactacaaggcgatccagtacggc
acaacatccgacggcctcatcgattacgacaaggtacgcctgctggcgctcgcccatcgc
ccccgcgtcatcctctgcggcgcaaccgcctattcgcgagtggtggacttcaaaaggttt
cgtgaaattgccgacgaagccggtgccatcctgctcgccgacatttcgcatatcgccggt
cttgtcgccaccgggaggcacccaagcccgatcgacgccgcacacgtcaccgtgacttgc
acgcacaaacaactcgccggacctcggggtggcgtgatcctcagcgggcgtgacgcgaac
accaagattcccggcttgcggaccaccttcagccgcctcctcgatcaagccgcttacccg
cgaatgcagggcgcgcctgccgccaatatgatcgcggcaaaggctgcggcgctgggctac
gcaatgtctgccgaattcgatacctgcatggcgcagatccgcagtacggcggatgaaatg
gccaaggcgtttcaggcactggactatgaagtggtcggcggctgcagtgaaaaccatacg
gtactggttcgcttgcgtggcggcattacgggcgccatcgcggaggcggcgctggggcat
tgcgggatcatcgtcagcaaacatcgcgtacccggcgacccccgctcggcacttgttacc
agcgggctgcgcatcggcacgggtgccttggcgcaacgccgggtcgatgtccacggcagc
cgccagatcgtcaatttgatcggccggattctgaatactgtggcgccgctcggcgaacag
gattacacgctcgaacccctgctccttgcgcagtttcgctcagaggtcgaaaccttgtgc
agggattatcctgtcgccgactacgtatag
DBGET
integrated database retrieval system