Pseudomonas sp. RU47: CCX46_08675
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Entry
CCX46_08675 CDS
T11150
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
psru Pseudomonas sp. RU47
Pathway
psru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CCX46_08675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psru02000
]
CCX46_08675
Transporters [BR:
psru02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CCX46_08675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
GST_C_4
Motif
Other DBs
NCBI-ProteinID:
AZZ75219
LinkDB
All DBs
Position
complement(1932375..1933442)
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AA seq
355 aa
AA seq
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MKQLFLATLLGSTIAMCTSAMAAGTDLKTLEAAAKAEGAVNSVGMPDDWANWKGTWEDLA
KTYGLKHIDTDMSSAQEIAKFAAEKDNATADIGDVGAAFGPIAVKQGVVQPYKPSTWDQV
PDWAKDKDGNWALAYTGTIAFIVNKKLLHGSEVPTKWADLKGGKYKVSIGDVSTAAQAAN
GVLAAALANGGDEKNIKPALLLFADIAKQGRLSMANPTIATMEKGEIEVGVVWDFNGLSY
KAKMANPDDYVVLIPSDGSVISGYTTIINKYAKNPNAAKLTREYIFSDAGQTNLARGNAR
PIRAEHLQLPEDVKAKLLPNEQYKKVTPIKDADAWEKTSKALPQQWNEEVIVEMK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcttttcctggcaacactgttaggctcgaccattgcaatgtgcacctccgcc
atggcggccggcaccgatctgaaaaccctcgaagccgctgcgaaagcggaaggtgccgtc
aacagcgtcggcatgcccgatgactgggccaactggaaaggcacctgggaagacctggcc
aaaacctacggcctgaaacacatcgacaccgacatgagctcggcccaggaaatcgccaaa
ttcgccgcagaaaaagataacgccaccgccgacatcggcgacgtcggtgcggccttcggc
ccgattgcggtcaaacaaggcgtggtgcaaccgtacaagccaagcacctgggatcaggtt
ccggactgggccaaggacaaggacggcaactgggcgctggcctacaccggcaccatcgcc
ttcatcgtcaacaaaaaactgctgcacggctccgaagtaccgaccaaatgggcagacctc
aagggcggcaaatacaaggtttccatcggtgacgtgagcaccgccgcacaagccgccaac
ggcgttctggctgcagcactggccaacggtggcgacgagaaaaacatcaagcctgcgctg
ctgctgttcgccgacatcgccaagcaaggtcgtctgtcgatggctaacccgaccatcgcc
accatggaaaaaggcgagatcgaagtcggtgtggtctgggacttcaacggcctcagctac
aaagccaagatggccaacccggatgactacgtggtgctgatcccgtccgacggttcggtg
atttccggctacaccacgatcatcaacaagtacgcgaaaaacccgaacgccgccaagctg
acccgcgaatacatcttcagtgacgccggccagaccaacctcgcgcgcggcaacgcccgt
ccgatccgcgccgagcacctgcaactgccagaagacgtgaaggccaaactgctgccaaac
gagcagtacaaaaaggtcaccccgatcaaagacgccgatgcgtgggaaaagacttccaag
gccctgccacagcagtggaacgaagaagtcatcgtagagatgaaataa
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