Pseudomonas sp. RU47: CCX46_10420
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Entry
CCX46_10420 CDS
T11150
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
psru Pseudomonas sp. RU47
Pathway
psru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CCX46_10420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psru02000
]
CCX46_10420
Transporters [BR:
psru02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CCX46_10420
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
ATR1_WY-dom
Motif
Other DBs
NCBI-ProteinID:
AZZ75545
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All DBs
Position
2327812..2329422
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AA seq
536 aa
AA seq
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MNILPSLWARVLAATLAVTALPVVHAKTPADQLIVGMSMINLLSLDPAAATGLDVSEINA
NLYDMLLVQDVAAPDRLLPALAERWQVSDDRKTLTFNLRQGVQFQSGNPLSAEDVAWSLQ
RVLKLNLALASTWKAYGFTADNVERSMRATDANTFVIELPRPTDPQLVLNTLATSPSAFI
LDRKKVLEHQKNNDLGAAWLVTHAAGSGAFVLNDWRANDVILMSRFDGYWGGPAKLKRIV
MRNMTESQSLRLMIERGDLDIAKGMSAPDIQALQKSDKVRTQTLQRGTLYYVALSVKQPM
FADARVRKAVRSLIDYQGINQTVMPHYGVINQRPMPLGLAARLPDPGYRLNVDEAKKLLA
EAGYPNGFKTSIRVLAEPPFINIASNLQSTLAQAGIEASIITGTGNQIYGAMRERSFDII
VGRGGGGAERHPHSSLRTLVYNPDNRDEAKLSNFQGWRTSFYSPELNQLIESAEVEPDAQ
KQQAQYQDIQQQLDQQVGAILPVSQMTDTVLVYADVADFQGHTAATTRYKDVYKKR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaacattcttccttcgctgtgggcgcgggttctggcggctaccctggcggtgaccgcg
ctacctgtcgtccatgccaaaaccccggccgatcaattgatcgtcggcatgagcatgatc
aatctgctgtccctcgacccggcggcggccaccggcctggacgtgtcggagatcaatgcc
aatctctatgacatgttgctggtgcaagacgtcgctgcgccggatcggctgttgccggca
ctcgccgagcgctggcaagtcagcgacgaccgcaagaccctgaccttcaatctgcgccag
ggcgtgcaatttcaatcgggcaacccgttgagcgccgaagacgtcgcctggtcgttgcag
cgcgtgctcaaactcaaccttgcgctggcgtcgacctggaaggcttacggttttaccgcc
gacaatgtcgagcgttcgatgcgcgcgaccgatgccaataccttcgtcattgaattgccg
cgccccaccgatccacagttggtgctcaacacgctggcgacctcgccaagtgccttcatt
cttgaccgcaaaaaagtcctcgaacatcagaagaacaatgacctcggtgccgcctggctg
gtgacgcacgccgccggcagtggtgccttcgtgctcaatgactggcgggccaacgacgtg
atcctgatgagtcgtttcgacggctactggggcggcccggccaagctcaaacgcatcgtc
atgcgcaacatgaccgagtcgcagtcgttgcgtctgatgatcgaacggggcgacctcgac
atcgccaaaggcatgtcggcgccggacatccaggccttgcagaaaagcgacaaagtccgc
acgcaaaccctgcaacgcggcacgctgtattacgtcgcactgagtgtgaagcagccgatg
ttcgccgacgcgcgcgtgcgcaaggctgtgcgctcgttgatcgactaccagggcatcaac
cagaccgtcatgccgcactacggcgtgatcaatcagcgcccgatgccgttgggactggcc
gcgcgcttgccggatcccggttatcgactgaatgtcgatgaggccaaaaaactcctggcc
gaagctggttacccgaacgggttcaagaccagtattcgcgtgctggccgaaccgcccttc
atcaacattgcctccaatctgcaatcgacgctggcgcaggccgggatcgaagccagcatc
atcaccggcaccggtaaccagatctacggcgccatgcgtgagcgcagtttcgacatcatc
gtcggccgtggcggtggcggcgccgaacgtcatccccattcgagcctgcgcacgctggtg
tacaacccggataaccgtgacgaagccaagctgagcaacttccagggctggcgcacttcg
ttctacagtcccgagttgaatcagttgatcgagagtgccgaagtcgagcccgatgcgcag
aaacagcaggcgcagtatcaggacatccagcagcaactcgatcagcaagtgggcgcgatt
ctgccggtctcgcagatgaccgacacggtgctggtctacgccgatgttgccgatttccaa
gggcacacggccgcgaccacgcgctacaaagacgtctacaaaaaacgttga
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