Pseudomonas sp. RU47: CCX46_11300
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Entry
CCX46_11300 CDS
T11150
Name
(GenBank) type VI secretion protein
KO
K11895
type VI secretion system protein ImpH
Organism
psru Pseudomonas sp. RU47
Pathway
psru02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
CCX46_11300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psru02044
]
CCX46_11300
Secretion system [BR:
psru02044
]
Type VI secretion system
Imp/Vas secretion system core components
CCX46_11300
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
Motif
Other DBs
NCBI-ProteinID:
AZZ75714
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All DBs
Position
complement(2524040..2525065)
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AA seq
341 aa
AA seq
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MATPSRHAPVALTLSQRLRREPQAFEWLQALLLLEREQPQADLLGSGTSPQTEALKLRGP
LTPAFAASQIEALHEEPGEPLTLDTPIFGLGGPDGPLPYAYQDWLQQRARAKDHAPAAFL
DLFQHRLLSLLYKVMRKHRVALGFVTPGASPVQAQLRALTGLLPKALQERQAVPDCAVLA
CTALFADGRRSLAGFAAIVREQFGVPVELSAYEGAWRQIPPASRSVIKPGGRNLQLGRSA
VAGTRVWDEHAGIRLTLGPLPSIQAARFLPDGESHPALASLAGLYFGPDLDVRLVLRVRG
AGPLKLARQTPVLLSWNGGLQRQASLGVQTIETRLRQLEIT
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccaagccggcatgcccctgtcgctctgaccctgagccaacgcctgcgccgt
gagccgcaggccttcgaatggctgcaggcgttgctgttgctcgaacgcgagcagccgcag
gccgatctactcggcagcggcacctcgccgcagaccgaagcgctgaaactgcgcgggcca
ctgacaccggcgtttgccgccagccagatcgaagccctgcacgaagagcctggcgaaccg
ctgacactcgacacaccgatattcggtctcggcggcccggacggccctctcccctacgcc
tatcaggattggctgcaacaacgggcgcgggccaaggatcatgcaccggccgcgtttctc
gatctgttccagcaccgcttgctcagcctgctctacaaagtgatgcgcaaacaccgggtc
gcgttgggttttgtcacgccgggggcttcgccggtgcaggcgcaattgcgcgcgctgacc
ggtttgctgcccaaggctttgcaggagcgccaggctgttcccgactgcgccgtgctcgcg
tgcacggcgttgtttgccgatggccgtcgctcactggcggggttcgccgcgattgtccgg
gagcagtttggcgtgccggtcgaattgagcgcttacgaaggtgcctggcgacagatcccg
ccggccagccgcagcgtgatcaaaccgggtggacgcaacttgcaactgggccgcagcgcc
gtggctggcacgcgggtctgggatgaacacgccggcattcgcctgaccctcgggccgttg
ccatcgatacaggcggcgcgctttctaccggatggcgaatcacacccggcactggccagc
ctcgccgggttgtatttcggcccggatctggacgtcagactggtgctgcgggtgcgcggg
gccgggccgctgaaactcgctcgccagaccccggttctgctgagctggaacggcggtttg
cagcgtcaggccagcctcggcgtgcaaaccatcgaaacccgccttcgtcagctggagatc
acctga
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