Pseudomonas sp. RU47: CCX46_11540
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Entry
CCX46_11540 CDS
T11150
Name
(GenBank) DNA-binding response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
psru Pseudomonas sp. RU47
Pathway
psru02020
Two-component system
psru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CCX46_11540
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CCX46_11540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psru02022
]
CCX46_11540
Two-component system [BR:
psru02022
]
OmpR family
QseC-QseB (quorum sensing)
CCX46_11540
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Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Phage_integrase
PDE8A_N
OKR_DC_1_N
KaiA_N
y4jL_C
Motif
Other DBs
NCBI-ProteinID:
AZZ75761
LinkDB
All DBs
Position
complement(2576999..2577661)
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AA seq
220 aa
AA seq
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MRLLLVEDDVALGEGIHQALGREGYTVDWLKDGSSALHALLSETFDVAVLDLGLPRMDGL
QVLRRLRDSGSNLPVLILTARDATEDRIAGLDAGADDYLIKPFDLDELKARLRALLRRSA
GRAQALIEHAGISLNPGTQQVSYQGQPVALTPKEYQLLHELLSPPGRVMTRDQLMQLLYG
WNEEAESNTLEVHIHHLRKKFSTDLIRTIRGVGYLVEERR
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtttattactggttgaggatgacgtggcgctgggtgaaggcattcatcaggcgctg
ggccgcgagggttacaccgtcgactggctcaaggacggcagcagcgcgttgcatgcgctg
ctcagtgaaaccttcgatgtcgccgtgctcgatctcggtctgccacgcatggacggcctg
caagtgctgcgccgcctgcgcgacagcggttcgaatctgccggtgctgattctgactgcc
cgcgacgctactgaagaccgcatcgccgggctcgacgccggagccgacgactacctgatc
aaaccgttcgacctggatgaactcaaggcacgcttgcgcgccctgttgcggcgcagtgcc
gggcgcgcccaggcgttgatcgagcatgccggcatcagccttaaccccggcacccagcaa
gtcagctatcagggccagcctgtggccctgacgcccaaggaatatcagttgctgcacgag
ctgctgtcgccaccgggccgggtgatgacccgcgatcaactgatgcaactgctctacggc
tggaatgaagaagccgaaagcaacaccctcgaagtgcacattcatcacttgcgcaagaag
ttttccaccgacctgatccgcaccatccgtggtgtcggttatctggtggaggagcgtcga
tga
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