Pseudomonas sp. RU47: CCX46_11585
Help
Entry
CCX46_11585 CDS
T11150
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psru Pseudomonas sp. RU47
Pathway
psru00300
Lysine biosynthesis
psru00470
D-Amino acid metabolism
psru01100
Metabolic pathways
psru01110
Biosynthesis of secondary metabolites
psru01120
Microbial metabolism in diverse environments
psru01230
Biosynthesis of amino acids
Module
psru_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CCX46_11585 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CCX46_11585 (dapF)
Enzymes [BR:
psru01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CCX46_11585 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AZZ75770
LinkDB
All DBs
Position
2583629..2584447
Genome browser
AA seq
272 aa
AA seq
DB search
MPLTFHKMHANGDDFVVIDSRNIANPVTGQLARRLGDRHRGIGFNQLAVVLDCADADASV
ELWNADGSALDVCGSATRGVADRLMREASRTSITLRTNRGLLTCERMPSGLIAVDMGEPL
FDWQDIPLAQEHDTLFLPLAGAPTACNMGNPHCTYFVDDLSSVDIAALGPSLETHPLFPQ
KTNVHFVQIIDRQHIRLRIWERNGAIPLGSGSCSCGAAVNGIRRGLLDHTVNVECDGGPV
TVHWNGSGPVTLSGPVEPTFSGTIPDTQLDLK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccactcaccttccataagatgcacgccaacggcgatgacttcgtcgtgatcgactca
cgcaacattgccaaccccgtcaccggccaactcgcccggcgcctgggtgatcgtcatcgc
ggcatcggtttcaaccaactcgccgtggtccttgattgcgcagacgccgatgcgagcgtg
gaactctggaacgccgacggctcagcgctcgacgtgtgcggcagcgccacccgtggcgtg
gcggacaggttgatgcgcgaagccagccgaacatcgatcaccctgcgcaccaaccgtggc
ttgctcacctgcgaacgcatgcccagcggattgatcgccgtcgacatgggcgaaccgttg
ttcgactggcaagacatccctctggcgcaagaacacgacacgctttttctaccgctcgcc
ggcgccccaaccgcgtgcaacatgggcaatccacactgcacctatttcgtcgatgacctc
agctccgtcgatatcgccgccctcggcccaagcctcgaaacccatccgttgtttccgcaa
aaaaccaacgtccacttcgtgcaaatcatcgaccgccaacacatccgcctgcgcatctgg
gaacgcaacggcgccatcccgctcggctccggctcatgctcatgtggtgcagcggtcaac
ggtatccgccgaggcctgctcgaccacaccgtcaacgtcgaatgcgacggcggccccgtc
accgtccactggaacggcagcggccccgtcaccctgagcggcccggtagaacccactttc
tccggcacaatccccgacacccaactcgacctcaagtga
DBGET
integrated database retrieval system