Pseudomonas sp. RU47: CCX46_12235
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Entry
CCX46_12235 CDS
T11150
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
psru Pseudomonas sp. RU47
Pathway
psru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CCX46_12235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psru02000
]
CCX46_12235
Transporters [BR:
psru02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CCX46_12235
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AZZ75895
LinkDB
All DBs
Position
complement(2726987..2728012)
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AA seq
341 aa
AA seq
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MVLNKAATAIFFAGLLSVTGQAAMAAESVNFVSWGGSTQDAQKQAWADPFSKASGITVVQ
DGPTDYGKLKAMVESGNVQWDVVDVEADFALRAAAEGLLEPLDFKVIQRDKIDPRFVSDY
GVGSFFFSFVLGYNEGKLGANKPQDWSALFDTKTYPGKRALYKWPSPGVLELALLADGVA
ADKLYPLDLDRAFKKLDTIKKDIVWWGGGAQSQQLLASGEASMGQFWNGRIHALQEDGAP
VGVSWKQNLVMADILVIPKGSKNKDAAMKFLAAASSAKGQADFSNLTAYAPVNLDSVERL
DSTLAPNLPTAYAKDQITLDFAYWAKNGQAIATRWNEWLVK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgaacaaagctgcaaccgcgatcttttttgcgggactgctcagcgtcaccggc
caggctgcaatggctgccgaaagcgtgaacttcgtcagctggggcggaagcacccaggac
gcgcagaaacaggcctgggccgatccgttcagcaaggccagcggcatcaccgtcgtgcag
gatggcccgaccgactacggcaaactcaaagccatggtcgagagcggcaacgttcagtgg
gacgtggtcgatgtcgaagccgacttcgccctgcgcgccgccgctgaaggcctgctcgaa
cccctcgatttcaaagtgattcagcgcgacaagatcgacccgcgtttcgtcagcgactac
ggcgtcggctcgttcttcttctccttcgtcctcggttacaacgagggcaaactcggcgcc
aacaagccgcaggactggagcgcgctgttcgacaccaagacctaccccggcaaacgcgcc
ctgtataaatggccaagccctggcgtgctcgaactggcgctgctggccgatggcgtagcg
gctgacaagctctacccgctggatctggatcgtgctttcaaaaaactcgacaccatcaag
aaagacatcgtctggtggggcggcggcgcgcagtcgcagcaactgctggcgtccggtgaa
gcgagcatgggccagttctggaacggccgcattcacgccctgcaagaagacggcgcaccg
gtcggcgtgagctggaaacagaacctggtcatggccgacattctggtcatccccaaaggc
tcgaaaaacaaggacgcggcgatgaagtttctcgccgccgccagcagcgccaagggccag
gctgacttctccaacctgaccgcctacgccccggtcaacctcgacagtgtggagcgtctg
gattcgacgctggcccccaacctgccgactgcctacgctaaggatcagatcactcttgat
ttcgcgtactgggccaaaaacggccaggccatcgcgacacggtggaacgaatggctggtc
aaatga
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