Pseudomonas sp. RU47: CCX46_12350
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Entry
CCX46_12350 CDS
T11150
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psru Pseudomonas sp. RU47
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psru03400
]
CCX46_12350
DNA repair and recombination proteins [BR:
psru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CCX46_12350
Archaeal homologous recombinant proteins
CCX46_12350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
DivIC
AAA_15
ABC_tran
RsgA_GTPase
nSTAND3
MMR_HSR1
nSTAND_NTPase5
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AZZ75918
LinkDB
All DBs
Position
complement(2749923..2753564)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDADGEIATGDPRTLLRRGTGEGYAEVDFVGVDGRRYRARWEANRAREKA
GGKLQASRQSLRDIDQDQLLASQKGEYKTQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKTKEAREAHKLLQDQATGVTPLAPEARAELDERF
NAAQQQLKLQQAQLKQLEQQHGWLKDLRVLQDAQQAAAEQLHSAQQQSESLAGERVTLTR
LEQLGPQRHQFARKTELDALLTPLAAQIAAHSQQHAELIERQTQLEHNLETANVALSEAQ
QRQSENAPLLRQAFDEQSTLARLAKDVAQSAEARLSAQQACTDGQNAIQALLDKQTQVAE
RLQRIAAELEQSAHLAPLSDAWNAYRDRLQQLMLIGNRLNKGQAELASLEENAARSAAEL
TTQKQQLEVLFKEAGAEPDAVAEQIGILGTLLQDNRKQLRAFEDLSRLWATQQDLDKRST
ELQQRQLNAQQERDRLTQDGVKSKAELTVAEQTLNVTRELLERQRLARSASVEELRAQLQ
DDQPCPVCGSNEHPYHQPEALLQSLGRHDESEQANAQQVVDQLKEKLIELRAEVGGVIAQ
QKELLQQQEQLVNQQQALAPSLDAHPLSAQLFNQDAAKRDAWLARQNEQLNQSITQDEQR
QSALLTLQQDAARLTQQLRQAETAHQQAAQHLSNQQRELGSDRQRLDEELTAFATLLPAD
TLEALRQEPAATFMQLDRQIAERLAQVDQQKEELTEQQQRQQTLEKEQDRQQTRVQQAQT
AEQQFNALAEQQQLCQDKLAQLLGEHGSAEQWQQQLEQAVEQARSAETGTAQDLQNVRTQ
IVQIAAELKAQQQSLQALQSENQDLASKIADWRARHPELDDGGLEDLLRVDDEQVAQLRQ
RLQLNEKAIEQARVLLQERDRLLLDHQSQHNGNLDAEQLTTALSDLQNQFNVSEQQCAEL
RAEQAEDQRRQNANQALAQQIADAYAEYQRWARLSALIGSATGDTFRKIAQAYNLDLLVH
HANVQLRQLVKRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
QRQGNGLSTLEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccattcgtttgaaaaacctcgcctcgctggccggccctttcgaaatc
gatttcaccgctgaaccgctggccagtgccggtttgttcgcgatcaccggcccgaccggc
gccggtaaaagtactttgctcgacgccttgtgcctggcgctcttcggcgccgtgccgcgc
ctgaacaacactggccgcgacgccaaagtccccgatgccgacggcgaaatcgccaccggc
gacccgcgcacgttgctgcgtcgcggtaccggtgaaggttatgccgaagtggatttcgtc
ggtgttgatggccgtcgttatcgggcacgttgggaagccaatcgcgcccgtgagaaggcc
ggcggcaagctgcaagccagtcgtcagagcctgcgcgacatcgatcaggatcaactgctc
gccagccagaaaggcgaatacaaaacccaactggaagccgcgctcggcctgaacttcgaa
cagttcacccgcgccgtgctgctggcgcagagcgagttcagtgcgttcctcaaagcggac
gacaacgaccgcagcgaactgctggaaaaactcaccgacaccgcgctgtatacccgcctc
ggccgccgcgccttcgacaagaccaaagaggcccgcgaagcgcacaagctgttgcaggat
caggccaccggcgtgaccccgttggcgcccgaagcccgggccgagctggacgagcgcttc
aacgccgcgcaacagcagttgaagttgcagcaggcgcagctcaaacaacttgagcagcag
cacggctggctcaaggacttgcgtgtattgcaggacgcgcagcaagccgccgcagaacaa
ctgcacagtgcccagcagcaatcggaaagtctggccggcgagcgggtgacactgacgcga
ctggagcagctcggcccgcagcggcaccagttcgcgcgtaaaaccgaactcgatgcgctg
ctgacgccgttggccgcacagattgctgcgcactcgcagcaacacgccgagctgatcgag
cgccaaacgcaactggagcacaacctcgaaacggcgaatgtcgccctgagcgaagcgcag
caacggcaaagcgagaacgcgccgctgttgcgtcaggcctttgatgagcaaagcaccctc
gcccgtctggccaaggatgtcgcgcaaagtgccgaagccaggctcagtgcgcagcaggct
tgcactgacggccaaaacgccattcaagccttgctggataaacagactcaagtcgccgag
cgcctgcaacgcatcgccgccgaactggaacaaagcgctcatctggcgccgttgagtgac
gcgtggaatgcctaccgcgatcgcctgcaacagctgatgctgatcggcaaccgcttgaac
aagggccaagccgaactggcgagcctcgaagaaaatgccgcgcgcagcgccgcagaactg
accacgcagaagcagcaactggaagtgctgttcaaagaggccggcgccgaacccgatgcc
gtcgccgagcaaatcggcatcctcggcacgctgctgcaggacaaccgcaaacaactgcgc
gccttcgaagacctgtcgcgcctgtgggccacgcagcaggatctcgacaagcgcagcacc
gagttgcaacagcgtcaactcaacgcccagcaggagcgtgatcgcctgactcaggacggg
gtgaaaagcaaagccgaactgaccgtcgccgaacaaaccctcaacgtcacccgcgagctg
cttgaacgccagcggctggcgcgcagtgccagtgtcgaagagttgcgcgcgcagttgcag
gacgatcagccatgcccggtctgcggcagcaacgagcatccgtatcatcagcccgaagcg
ctgctgcaaagtcttggtcgccatgatgaaagcgaacaggccaacgcccagcaagtggtc
gatcagctcaaggaaaagctcatcgaactgcgcgccgaagtcggtggcgtgattgcgcaa
cagaaagagctgctgcaacagcaagaacaactggtgaaccagcagcaagcgttggcgcca
agcctcgatgcgcatccgctgtccgcgcagttgttcaatcaggacgccgccaagcgcgat
gcctggctcgcccggcaaaacgagcagctgaaccagagcatcactcaggacgaacaacgc
cagagcgccctgctcaccctgcaacaggatgccgcgcgcctgacccagcaattgcgtcag
gccgaaaccgcgcatcagcaagccgcgcagcacctgagcaatcagcagcgcgaactcggc
agcgaccgtcagcgccttgatgaggaactaacagcgttcgccacgctgctccccgccgat
acccttgaagccttgcgccaggaaccggcggcgaccttcatgcagctcgaccggcagatc
gccgagcgtctggcgcaagtcgaccagcagaaggaagaactcaccgagcagcaacagcgt
cagcagacgctggagaaagagcaggatcgccagcagacccgcgtccagcaagcgcaaacg
gctgagcaacagttcaatgcgctggccgaacagcagcaactctgccaggacaaacttgcg
cagttgctgggtgaacacggcagcgccgagcagtggcagcagcaactggaacaggctgtg
gagcaagcgcgctctgccgaaactggcacagctcaagacctgcaaaacgtgcgcacgcag
attgtgcagatcgccgctgaactcaaggcgcagcaacagagtttgcaggcgctgcaaagc
gagaatcaggatctggcgagcaagattgccgactggcgcgctcgtcatcccgagctggat
gacggcggcctcgaagacttgttgcgggtcgatgatgagcaagtcgcgcaattgcgccag
cgcttgcagctcaatgaaaaagccatcgaacaagccagggtcttgctgcaggagcgtgat
cggttgttgctcgatcatcagtcgcaacacaacggcaatcttgatgccgagcaactcacc
accgctttgagcgatttgcagaatcagttcaatgtcagcgagcagcaatgcgccgaactg
cgtgccgaacaggctgaagatcagcgccggcagaacgccaaccaggcgctggcccagcag
atcgccgatgcctacgccgaatatcaacgctgggcgcgactgagtgccttgatcggctcg
gccaccggtgacaccttccgcaagatcgcccaggcctacaacctcgacctgctggtgcac
cacgccaacgtgcagttgcgccaactggtcaaacgctatcgcctcaagcgcggtggcagc
atgcttggcctgctggtgatggacaccgaaatgggcgatgaactgcgttcggtgcactcg
ttgtccggcggcgagacgttcctggtgtcgctggcgttggcattgggactagcgtcgatg
gcgtcgagcacgctgaaaatcgaatcgctgtttatcgatgaaggctttggcagccttgat
ccggaatcgctgcaactggcgatggatgcgctcgatggtttgcaggcgcaggggcgcaag
gtcgcggtgatttcccatgtgcaggaaatgcacgagcggattccggtgcagattcaggtg
cagcgccaaggcaatggtttgagcacgctggaggtaaaatga
DBGET
integrated database retrieval system
