Pseudomonas sp. RU47: CCX46_12355
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Entry
CCX46_12355 CDS
T11150
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psru Pseudomonas sp. RU47
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psru03400
]
CCX46_12355
DNA repair and recombination proteins [BR:
psru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CCX46_12355
Archaeal homologous recombinant proteins
CCX46_12355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AZZ75919
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All DBs
Position
complement(2753561..2754805)
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AA seq
414 aa
AA seq
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MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLRQLQLAQPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVSAHEQQPLLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDA
ERLLLPLPNAQGEIAAWCLALPFLRPAEVTGAHLGDNYLRGIGQVHEWLSEAANAKRKPG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSISYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYQHQILDVTLDGETLVSVEPKLIPRSVNLQRIGPAPLAEILLQL
ADLPNIDLLAETQRQPWLEVRVTLDEPQPDLRHQVENALQGKAVRLVRIAAEYAGNRGAD
GVEDGTALIELDQLTPQELFSRAWFDNYGNEVDEQTLKDFAELLQDVQLEGEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgttccacacctccgactggcaccttgggcaaaacctgcacggccaggagcgc
gatttcgagcacgcctgttttctcgaatggctgctgcgccaactgcaactggcgcagccg
gatgtgctgctgattgccggggacatcttcgacacggtcaatccgccggtcaaagctcag
gaacggctctacgatttcatcgtcagcgctcacgagcagcaaccgttgctgaccatcgtg
atgattgccggcaaccacgattccggctcgcggatcgaactgccggcgccgttgatgcgc
cgtttgcgcacgcatgcgctgggccgggtgttgtggctggatgatggccaactcgatgcc
gagcgtttgctgctgccgctgccgaatgcccaaggcgaaattgcagcgtggtgcctggcg
ctgccgtttctgcgcccggcggaagtcaccggcgcgcatctgggcgacaactatttgcgt
ggcatcggtcaggtgcatgaatggctgagcgaagcggccaatgccaagcgcaagcccggt
caggcattgatcgccatcagccacgcgcacatggctggcggctccgtgtcggaggattcc
gagcgcagcctgatcatcggtaacgccgaagctctgcccgccagtctgttcgggccgagc
atcagttacgtcgccctcggccatttgcacaagccgcagaaggttaatggtgaagagcgc
attcgctacagcggctcgccgattccgttgtcgttctcggaaatcggttatcagcaccag
attctcgacgtcaccctcgacggtgaaaccctggtcagcgtcgagccgaaactgatcccg
cgctcggtcaacctgcaacgcatcggtccggcaccgctggccgagattctgctgcaactg
gcggatctgccgaacatcgacctgctcgccgaaactcagcgccagccgtggctcgaagtg
cgcgtaaccctcgacgagccgcagccggatctgcgccatcaagtggaaaacgctctgcaa
ggcaaagccgtacgactggtgcgcattgccgctgaatacgccggcaaccgtggtgctgac
ggcgtcgaagatggcaccgcgctgatcgaactcgaccaactcaccccgcaggaattgttc
agccgcgcctggttcgacaactacggcaacgaggtcgatgaacagacgctgaaggacttc
gccgaactgctgcaagacgtacaactggagggcgagcagccatga
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