Pseudomonas sp. RU47: CCX46_13165
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Entry
CCX46_13165 CDS
T11150
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psru Pseudomonas sp. RU47
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psru03032
]
CCX46_13165
03400 DNA repair and recombination proteins [BR:
psru03400
]
CCX46_13165
Enzymes [BR:
psru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CCX46_13165
DNA replication proteins [BR:
psru03032
]
Prokaryotic type
DNA Topoisomerases
CCX46_13165
DNA repair and recombination proteins [BR:
psru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CCX46_13165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AZZ76072
LinkDB
All DBs
Position
complement(2964707..2965744)
Genome browser
AA seq
345 aa
AA seq
DB search
MPDTALTVELPADLHYVDDTQPGITRKKLRGKFSYFEPSGERISDPDEIKRINALAVPPA
YTNVWICADPRGHLQATGRDARGRKQYRYHARWREVRDADKYSRLREFGLALPKLRQQLE
ALLAAPGFSRDKVMATVITLLDATLIRVGNTQYARDNRSYGLTTLRSRHVEVNGSAILFQ
FRGKSGIEHQITVKDRRLARIIKRCLEIPGQNLFQYLDENGERHTVSSSDVNAYLQTLTG
ADFTAKDYRTWAGSALALAVLRELQWASETEAKRHVVEMVKGVAKQLGNTPAVCRKCYIH
PAVVEKFMLGALAELPRPRVRKGLRAEEVALAMFLERMSEMTDAP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacaccgcgctgaccgtagaactgccagccgatctgcattacgtcgatgacacc
cagcccggtatcacccgcaaaaaactgcgcggcaagttcagctatttcgaaccgtcgggc
gagcgcatcagcgaccctgacgaaatcaaacgcatcaacgcgctcgccgtgccgccggcc
tataccaatgtgtggatctgcgccgatccacgcggccacttgcaagccaccggccgtgat
gcccgtggccgcaagcaatatcggtatcacgcgcgctggcgcgaagtgcgcgatgccgac
aagtattcgcggctgcgcgagttcggtcttgcgctgccaaagttgcgccaacaactggag
gcgttgttggccgcgcccggcttcagtcgcgacaaggtcatggccacggtgatcaccctg
ctcgacgccacactgattcgcgtcggcaatacacaatacgcccgcgacaaccgctcctat
ggcctgaccaccctgcgcagtcgacatgtcgaggtcaacggcagcgcgatcctgttccag
tttcgcggcaagagtggcatcgaacatcagatcaccgtcaaggaccggcgcctggcgcgc
atcatcaagcgttgtctggagattcccgggcagaacctgttccagtatctggatgaaaac
ggcgagcgccacaccgtcagttcctccgacgtcaacgcctacctgcagaccctcaccggc
gccgatttcaccgccaaggattaccgcacctgggccggtagtgctttggccctggcggtg
ttgcgtgagttgcaatgggcatccgagacggaagccaaacggcatgtggtggagatggtc
aaaggcgtcgccaagcaactcggcaacaccccggcggtttgccgaaagtgctacatccac
cctgccgtggtggaaaaattcatgctcggcgcgcttgcagaactgccgcgtccgcgcgta
cgcaagggcttgcgggccgaggaagtcgcattggcaatgtttctcgagcgaatgagcgaa
atgaccgacgcaccttga
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