Pseudomonas sp. RU47: CCX46_19370
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Entry
CCX46_19370 CDS
T11150
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
psru Pseudomonas sp. RU47
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psru03000
]
CCX46_19370
Transcription factors [BR:
psru03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CCX46_19370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AZZ77210
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Position
4348133..4349032
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AA seq
299 aa
AA seq
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MLNYRQLHYFWVVAKTGSIVRACEQLNLTPQTISGQISLLEQTYGIELFRRVGRQLELTE
AGRQALPYAEQMFQLGGELELMLRAQPNEQQILFRVGVADVVPKSIVYRLIAPTMELNEP
LRITCREDKLERLLADLAIQRLDLVISDSPMPSHLDIKGYSQKLGECGISFFATPELAAR
YGQDFPRSLHGAPLLIPGPETVVRSRLQRWFAEQQIQPQIVGEFDDSALMQAFGQSGSGI
FIGPSVIADEVKRQYGVELIGQTDAVTESFYAISVERKVKHPGIVAITEGARRELFTAL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgctcaactaccgacaactgcattacttctgggtcgtggccaagaccggcagcatcgtg
cgcgcctgcgagcaactgaacctgacaccacagaccatcagcgggcagatttccctgctc
gaacagacttatggcatcgaattattcagacgcgtaggccggcaactggagttgaccgaa
gccgggcgacaagccctgccctacgccgagcagatgttccagctcggcggcgaactggaa
ctgatgctgcgcgcccagcccaacgaacagcagattctgttccgcgttggcgtggcggat
gtggtgccgaaatccatcgtctaccgcctgattgcgccgaccatggagctgaacgagccg
ctgcgcatcacctgccgcgaagacaaactcgaacgcttgctggccgatctggccattcag
cgtctggacctggtgatttccgacagcccgatgccctcgcacctcgatatcaagggctac
agccagaagctcggcgagtgcgggatcagtttcttcgccaccccggaactggcagccaga
tacggtcaggactttccgcgcagcctgcatggcgcgccgctgttgattcccggaccggaa
accgtggtgcgcagccgcttgcagcgctggtttgccgagcagcagatccagccgcaaatc
gtcggcgagtttgatgacagtgccttgatgcaggcgttcggccaatccggcagcgggatt
tttatcggcccgagcgtgattgccgatgaagtgaagcgccagtacggcgtcgagctgatt
ggccagaccgacgcggtgaccgagtcgttctatgccatttcggtggagcgcaaggtcaag
caccccggcatcgttgcgattaccgaaggtgcccgacgcgagctgtttactgcgttatga
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