Pseudomonas sp. RU47: CCX46_20240
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Entry
CCX46_20240 CDS
T11150
Name
(GenBank) helicase SNF2
Organism
psru Pseudomonas sp. RU47
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
SNF2_assoc
Motif
Other DBs
NCBI-ProteinID:
AZZ77382
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Position
complement(4548676..4551969)
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AA seq
1097 aa
AA seq
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MSIFIEQLKSLAWTQAFSSKALAKARAYAAEDRVEIIEINDRKIEAFCVGSESQAYEQSI
YLSEDRLGSVNLRCLCSCPVVIDCKHCAAVLYHLQGSADDASESDAQIPLGRALEHWLST
IPVPAKPAEEGAQTAGTRLFYKLKPTPVSGKWLLDIFKVSQLKSGELREVKPMYSLAEML
MRQPGYLSELDLRVARLLVAMHSHHAYYSGYPLEGSSGAELLEMLLRTSRLFLDFEDLRP
LVLGAKRIGQFAWAEQADGGFRAQWSSAEAAQETVLALEPLYYLDREQRQIGPLFNELEE
KLASHLTLAPDIPARQAMQFSHRMSTATRIPPPHQLTERVIDDVLPQPQLTLVSGRERSR
WEYILEHRAALVFTYNGQPTVDRNPEVMILNGTETQRIQRQPAVEKKLRQILQKLGFKKA
TRKSSLDRPGEMFTLPDDSAWLGFMHEGLATLRASNWEVEMSPGFHFNVQPVEHWYAEVE
EEAGHQWFDLQLGIVVNGQRYSLLPILLHLLRTQPRLLDPVNLAQRSDDEKLLIELKPSG
FGDPSGAKVALPLSRVKPLMATLGELYLGGHQGDALRLSVPDAARLSMLDGVPLDWQGGE
RLRTFAKRLQNSSHSHVAAPAGLNAQLRPYQLEGLNWMQTLRELEVGGILGDDMGLGKTL
QTLAHLLTEKHAGRLDCPALAVMPTSLIPNWLDEAERFTPQLKVLALHGSGRQKDFADLA
EYDLVLTTYALLPRDLETLQPQTWSVLILDEAQNIKNPLSKAAQAARDLQARQRLCLSGT
PLENHLGELWSQFHFLMPGWLGDSKSFNRDYRTPIEKHGNVQRMQHLTARIKPFLLRRKK
DQVATELPPKTEIVHWVDLSDGQRDVYETVRVAMDKKVRDEIARSGVARSQIIILDALLK
LRQVCCDLRLIKMPMTAKALRSGSGKLVSLMEMLEELLGEGRRILLFSQFTSMLALIEQE
LQQRDIAYSLLTGDTTDRRTPVKDFQGGKVPLFLISLKAGGTGLNLTAADTVIHFDPWWN
PAVENQATDRAYRIGQNNPVFVYKLIARGTVEEKIQALQQEKAALAGAVLEGGTTGGWKL
EQSDIEALFAPLPVFKD
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttcatcgaacagctcaagtcgttggcctggactcaggcattcagtagcaag
gcgctggccaaggctcgcgcttatgccgccgaggaccgggtagagatcatcgaaatcaat
gacagaaagatcgaggcgttctgcgtcggttcggaaagtcaggcatatgaacaaagcatt
tacctgtccgaagatcggctgggttccgtcaacttgcgttgcttgtgcagctgtcctgtc
gtaatcgactgcaagcattgcgctgcggtgctctatcacctgcagggcagtgctgatgat
gcgtctgaaagtgacgcacagatcccgttgggtcgggcgctggaacattggctttcgacc
atccccgttccggccaagcctgctgaagaaggcgcgcaaaccgcaggcacgcgcctgttt
tacaagctcaagccaacgcctgtgagcggcaagtggctgctcgatattttcaaggtttcc
cagctcaagagcggcgagttacgcgaagtcaaaccgatgtattcgctagcggaaatgctc
atgcgtcagcccggctacctgtccgagctggatctgcgcgttgccaggctgctggttgcc
atgcactctcaccacgcctattacagcggctatccgctggaaggcagcagcggcgccgaa
ctgctggaaatgctcctgcgcacctcgcggctgttcctcgatttcgaggatctgcgaccg
ttggtgctgggcgcgaagcgcatcggccagttcgcttgggccgagcaggctgacggcggg
ttccgtgcacagtggagcagtgccgaggctgcgcaggaaactgtgctggcgctggagccg
ctttattacctggatcgtgaacagcggcagattggccctctgttcaatgagctggaagaa
aaactggccagccatttgactctggcgccggacattccggcgcgtcaggccatgcagttc
agccatcgcatgagcacggcaacgagaatcccgccgccccaccaattgaccgaacgagtc
atcgacgacgtacttccacagccgcaactcaccctcgtcagcggtcgggagcgctcgcgc
tgggaatacattctcgagcaccgcgccgccctggtgtttacctacaacggccagcccacg
gtggatcgcaacccggaagtaatgatcctcaacggtaccgaaacccagcgcattcaacgc
cagcctgcggtggaaaagaaactgcgccagatcctgcaaaagctcggtttcaaaaaagcc
acgcgcaagagctcgctggatcgtcccggcgagatgttcacgttgccggatgattccgcc
tggctcgggtttatgcacgaagggcttgccacgttgcgcgcctcgaactgggaagtggag
atgagtcccggctttcatttcaatgtgcaaccggttgagcattggtacgccgaggtcgaa
gaagaggctgggcatcagtggtttgacttgcagttgggtatcgtcgtcaatggccagcgc
tatagtttgctaccaatccttctgcacttgttgcgcacccagccgcgcttgcttgacccg
gtcaatctggcacaacgcagcgatgacgaaaaactcctgatcgaactgaaacccagcggt
tttggcgacccttcaggcgccaaggtggcgctgccgctgagtcgggtcaaaccgctgatg
gccacgctgggcgagttgtacctgggcggtcatcagggcgatgcactgcgcttgagtgtc
ccggatgccgcgcgcttgagtatgctcgatggcgtaccgctggattggcaaggtggcgag
cggctgcgcacctttgccaagcgcctgcagaattccagtcactcccacgtcgctgcgccg
gccggccttaacgcgcaactgcgcccgtatcagctcgaagggctgaactggatgcagacc
ctgcgcgagcttgaggtcggcggcattctgggcgatgacatggggctgggcaaaacgctg
caaaccttggcgcatctgctcacggaaaaacacgccggtcgccttgattgtccggctctg
gcggtgatgccgaccagcctgattcccaactggctcgacgaggccgagcgtttcactccc
cagttgaaagtattggcgctgcacggctcgggtcggcaaaaggatttcgctgatctggct
gagtacgatctggtgctgaccacttacgcgttgctgccgagggatctggagaccttgcag
ccgcagacgtggagcgtgctgattctcgacgaagcgcagaacatcaagaacccgctcagc
aaagccgcgcaggccgcacgcgacttgcaggcccgtcagcgcttgtgcctgagcggcacg
ccattggaaaaccacttgggcgagctttggtcgcagtttcatttcctcatgcccggttgg
ctcggcgacagcaagtccttcaatcgcgattaccgcacgccaatcgagaagcacggcaat
gttcagcgcatgcagcacctgaccgcgcgcatcaagccgtttttgctgcgccgcaaaaag
gaccaggtcgccaccgagctgccaccgaaaaccgaaatcgtgcattgggtggatctcagc
gacggccaacgcgatgtctatgaaacggttcgcgtggcgatggacaaaaaagtccgcgac
gaaattgcccgcagtggcgtggctcgcagtcagatcatcattctcgatgccttgctcaag
ctgcggcaggtctgttgcgatttgcgcctgatcaagatgccgatgacagcaaaggcactg
cgttccggcagtggcaagttggtcagcttgatggagatgcttgaagagctgctcggcgaa
ggtcgtcggatcctgttgttttcgcagttcacctcgatgctcgcgttgatcgagcaagag
ttgcagcaacgtgacattgcctattcgctgctgaccggtgataccacggaccgtcgcaca
ccggtgaaggattttcagggcggcaaggtgccgttgtttctaatcagtctgaaggccggg
gggaccggtttgaacctgaccgctgcggacacagtgatccacttcgacccttggtggaac
ccggcagtggagaatcaggcaaccgatcgtgcgtatcgaatcgggcaaaacaacccggtg
ttcgtttacaagctgatcgctcgcggcacggtagaggaaaaaatacaggcgttgcagcag
gagaaagccgcgctggccggggcggtgcttgaaggcgggacgacgggtggctggaagctg
gagcagagtgacatcgaggcgctgtttgcaccgttgccggttttcaaggattga
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