Pseudomonas sp. RU47: CCX46_20415
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Entry
CCX46_20415 CDS
T11150
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psru Pseudomonas sp. RU47
Pathway
psru00550
Peptidoglycan biosynthesis
psru01100
Metabolic pathways
psru01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CCX46_20415 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CCX46_20415 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psru01011
]
CCX46_20415 (mrdA)
Enzymes [BR:
psru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CCX46_20415 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
psru01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CCX46_20415 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AZZ77416
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All DBs
Position
complement(4585402..4587294)
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AA seq
630 aa
AA seq
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MPEPIPIKDHEKETRLVNKRLIACAMFVFAVSCALVVRLYILQVVEFDYHSTISENNRVH
VLPIPPTRGLIYDRNGVLLADNRPSFNLTITRERATDVNQELDEVINLLHLPAEDRTVFD
KAMKQSRHPFTPVTLFYELTEEQIAVLAVNEFRLPGLDVEPQFVRHYPLGAHFAHSIGYV
GRINEKESKSLDSVEYRGTQSIGKTGIERFYEAQLHGHVGYEEVETNAQGRVLRVLKHTD
PVPGQNIVLSLDIKLQEAAEAALGDRRGSVVALDPSTGEVLAMVSNPSFDPNLFVTGISS
KEYSALRDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDAGVVTPQTRVFDPGYYQLPDF
DHKYRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYMAMFGLGEKVSLDMFE
ESPGLMPSQAWKRATRRQAWFPGETVILGIGQGYMQVTPLQLAQATALIANKGVWNRPHL
AKTVDGVAPVDEHPMPNILLKDPRDWEQVNHGMQMVMHDARGIARAAAAGAQYRIAGKSG
TAQVVAIKQGERYNREKTLERHRDNALFVGFAPAEHPKIAISVMIENGEAGGRVAGPVVR
QIMDAWLLDQDGHLKPQYAAPTKAPGDPHV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacccatcccgatcaaggatcacgaaaaagagacgcgtctggtcaacaaacgg
ttgatcgcctgcgccatgttcgtcttcgccgtcagctgcgccctggtcgtgcgcctgtac
atcctgcaagtggtggagttcgactaccactcgaccatctccgaaaacaaccgcgtccac
gtcttgccgatcccgccgacacgcggcttgatctacgaccgcaatggcgtgctgctcgcc
gataaccgccccagtttcaacctgaccatcacccgcgaacgcgccaccgacgtcaatcaa
gaactggacgaagtcatcaaccttctgcacctgccagcagaagatcgcaccgtcttcgac
aaggccatgaagcagtcccgccacccattcacgccggtgacgctgttctatgaactgacg
gaagagcaaatcgccgtactggccgtcaacgagttccgtctcccgggcctcgatgtcgag
ccgcagttcgtccgccattacccactcggcgcacatttcgcccactcgatcggctacgtc
ggccggatcaacgagaaagaatccaagagcctcgactcggtcgagtaccgtggtacccaa
tccatcggtaaaaccggtatcgagcgtttctacgaagcgcagttacacggccacgtcggt
tacgaagaagtggaaaccaacgctcaaggtcgcgtactccgtgttttgaaacacaccgac
ccggtccccggccagaacatcgtcctgagcctcgacatcaagctgcaagaggcggccgaa
gccgctctgggtgatcgtcgtggttcagtggtcgcgctcgatccttcgaccggtgaagtg
ttggccatggtcagcaatccgagttttgatccgaatctgttcgtcactggcatcagttcc
aaagaatattcggcactgcgagactcgatcgaccgtccgctgttcaaccgcgtactgcgc
gggctctacgcgccaggttcgacgatcaagccagaagtggcaattgccggcctcgacgcc
ggtgtcgtgacgccgcagacccgcgttttcgaccccggttattaccaactcccggacttc
gatcacaagtaccgcaactggaaccacagcggtgacggctgggtggacatggacgcggcg
atcatgcgttccaacgacacctacttctacgatctggcccacaagctcggtatcgatcgc
ctgcacgattacatggccatgttcggcctcggcgagaaagtctcgctggacatgtttgaa
gagtcgcccggtctgatgccatcgcaagcgtggaagcgcgcaacgcgccgccaggcctgg
ttcccgggcgaaacggtcatcctcggcattggtcagggctatatgcaggtcacgccgttg
caactggctcaagccacggcgttgatcgccaacaaaggcgtatggaatcgtccgcacctg
gccaagaccgtcgacggtgtcgctccggttgacgagcatccgatgccgaacattctgctc
aaggatccgcgtgactgggagcaggtcaaccacggcatgcagatggtgatgcacgatgcc
cgaggcatcgcccgcgcggcagcggccggtgcgcaatatcgcatcgctggcaagagtggt
acggcgcaagtggtggcgatcaagcagggcgaacgctacaaccgtgagaaaaccctcgaa
cggcaccgcgataacgccttgtttgtcggtttcgccccggccgagcatccgaaaatcgcg
atttcggtgatgatcgaaaacggtgaggccggtggtcgtgtcgccggtcccgtggtgcgg
cagatcatggacgcctggctgcttgatcaggacggccatctcaagccgcaatatgcggcg
ccgaccaaggcgccgggtgacccgcacgtttaa
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