Pseudomonas sp. RU47: CCX46_21225
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Entry
CCX46_21225 CDS
T11150
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
psru Pseudomonas sp. RU47
Pathway
psru00521
Streptomycin biosynthesis
psru00523
Polyketide sugar unit biosynthesis
psru00525
Acarbose and validamycin biosynthesis
psru00541
Biosynthesis of various nucleotide sugars
psru01100
Metabolic pathways
psru01110
Biosynthesis of secondary metabolites
psru01250
Biosynthesis of nucleotide sugars
Module
psru_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CCX46_21225 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CCX46_21225 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CCX46_21225 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CCX46_21225 (rfbB)
00525 Acarbose and validamycin biosynthesis
CCX46_21225 (rfbB)
Enzymes [BR:
psru01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CCX46_21225 (rfbB)
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NCBI-ProteinID:
AZZ77566
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Position
complement(4762894..4764012)
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AA seq
372 aa
AA seq
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MALNGSAVRSSRVSFRVKILVTGGAGFIGSAVIRHIISNTSDAVVNVDKLTYAGNLESLA
EVSQNSRYAFERVDICDRDQIDRVLREHQPDAIMHLAAESHVDRSISGPSEFIQTNIIGT
YTLLEAARHYWAALDDARKASFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKA
SSDHLVRAWARTYGLPTLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPVYGKGNQVRD
WLYVEDHARALYKVVTEGVIGETYNIGGHNEKQNIEVVHTLCALLDELRPDSAHRPHASL
ITYVQDRPGHDVRYAIDASKIQRELGWTPEETFETGIRKTVEWYLNNTEWVEHVKSGSYQ
QWIDQNYADRSN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaatggcagcgctgtccgcagctcaagggtatcgtttcgcgtgaaaattcta
gtaaccggcggcgctggcttcattggctcggcagtcatccgtcacatcatctctaacact
tccgatgcggtcgttaacgtcgataagctgacttacgctggtaatctggagtcgctggcg
gaggtcagccagaattcgcgctatgcatttgaacgcgtcgatatctgtgatcgtgatcag
atcgaccgtgtcctgcgtgagcaccaaccggatgcaatcatgcacctggccgcagaatcc
cacgtcgaccgctcgatctctggtccgtccgagttcattcagaccaatatcatcggcacg
tacacgctgcttgaagctgcccgccactactgggctgcgctggatgatgcgcgtaaagcc
agtttccgcttccaccacatttcgactgatgaagtttacggagaccttgaaggtccggaa
gacctcttcaccgaaaccacaccgtatcagccaagctcgccatactcggccagtaaagcc
agttccgatcacttggttcgcgcttgggctcgtacatacggcttgcctactctggtgacc
aactgctccaacaactacggcccatgccatttccctgagaagttgatcccgctgatcatt
ctcaatgcgctggaaggcaagccgctgccggtttatggcaaaggtaaccaggtacgtgac
tggctgtatgtcgaagatcacgctcgtgctttgtacaaagtcgtgaccgaaggtgtgatc
ggtgagacttacaacatcggcggtcataatgaaaaacaaaacatcgaagtggtgcatacc
ctgtgtgcgttgctcgatgagttgcgccctgattctgcccatcgtcctcatgccagcctg
attacctatgttcaggatcgccctggccatgacgtgcgttatgcaatcgatgcgagcaag
attcagcgtgagctgggctggacaccggaagagacttttgaaaccggtattcgcaagact
gttgagtggtatctgaataacactgagtgggtggagcacgtgaagagcggaagctaccag
cagtggatcgatcagaactacgcggatcgctcgaattaa
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