Pseudomonas sp. RU47: CCX46_21275
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Entry
CCX46_21275 CDS
T11150
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
psru Pseudomonas sp. RU47
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psru03032
]
CCX46_21275
03400 DNA repair and recombination proteins [BR:
psru03400
]
CCX46_21275
Enzymes [BR:
psru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CCX46_21275
DNA replication proteins [BR:
psru03032
]
Prokaryotic type
DNA Topoisomerases
CCX46_21275
DNA repair and recombination proteins [BR:
psru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CCX46_21275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AZZ77576
LinkDB
All DBs
Position
complement(4773649..4776423)
Genome browser
AA seq
924 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA
VVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSAVRLMEVIREELEVIRAEYGDQRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLSEGEYITTMLPVDLEAMKRQADEEEAEGAEADVE
EIENSNETDEERRARIKAADRKKAPFIFMSTANGTVKKTPLVAFSRQRSVGLIALELDEG
DILISAAITDGEQEIMLFSDGGKVTRFKESEVRAMGRTARGVRGMRLPEGQKLISMLIPE
EGSEILTASERGYGKRTAITEFPEYKRGGQGVIAMVSNERNGRLVGAVQVQDGEEIMLIS
DQGTLVRTRVDEVSSLGRNTQGVTLIKLAKDETLVGLERVQEPSEVEGEELEGEEGEEFE
GSVVIDDAGEDQQLDAAADEEPQE
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtgatcgtcggccgtgcactgccggatgcgcgcgatggc
ctcaagcccgtgcaccgtcgcgtactgttcgcgatgagcgagctgggcaacgacttcaac
aagccgtacaagaaatctgcccgtgttgtcggcgacgtgatcggtaagtatcacccgcac
ggtgataccgcggtgtacgacaccatcgttcgtatggctcagcctttctccctgcgctac
ctgctggtagacggtcagggcaacttcggttcggtcgacggcgacaacgctgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcgcacgagctgctggctgacctgcacaaa
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggcggtcatgccg
acccgtattcccaacctgctggtcaacggctccagcggtatcgccgtgggcatggcgacc
aacattccgccgcacaacctcggtgaagtcatcgacggttgcctggcgctcatcgacaac
cctgagctgaccgtcgatgagctgatgcaatacattcccggtccggacttcccgactgcc
gcgatcatcaacggtcgcgccggcatcatcgaagcctaccgcaccggtcgcgggcgcatt
tacatgcgtgcgcgttcgatcattgaagacatcgacaaggtcggtggccgtcagcagatc
gtcatcaccgagctcccttatcagctgaacaaggcgcgtctgatcgagaagatcgccgag
ctggtcaaagagaagaagctggaaggcatcaccgagctgcgcgacgagtccgacaaggac
ggtatgcgcgtcgtgatcgaactgcgtcgcggcgaagtgcctgaggtgatcctcaacaac
ctctacgcccagacccagctgcaatcggttttcggcatcaacatcgttgcgctgatcgac
ggccgtccacgcatcctgaacctcaaggatctgctggaagccttcgtccgtcaccgtcgc
gaagtggttacccgccgtaccgtgttcgaactgcgtaaggcgcgcgagcgtggtcacatc
ctcgaaggccaggccgttgccttgtcgaacatcgacccggtcatcgccctgatcaaagcc
tcgccgacgccgtcggaagctaaagaagcgctggtcagcacgccgtgggagtcttcggcg
gtggtggcgatggttgagcgtgccggtgccgattcgtgccgtccggaaaacctcgatccg
caatacggtctgcgcgaaggcaagtacttcctgtcgccagaacaggcacaagccattctg
gaactgcgtctgcaccgtctgactggtctggaacacgaaaaactgctggccgagtatcaa
gagatcctcaaccagatcggcgagctgatccgcatcctcaacagcgccgtgcgcctgatg
gaagtgatccgcgaagagctggaagtgatccgtgccgaatacggcgaccagcgtcgcacc
gaaatcctcgatgcccgtctcgatctgaccctgggtgacatgatcccggaagaagagcgt
gtcgtgaccatctctcacggtggctacgccaagacccagccattggctgcgtaccaggct
cagcgtcgtggcggtaaaggcaagtcggctactggcgtcaaggatgaggactacatcgct
cacctgctggttgccaacagccacaccacgctgctgctgttctccagcaagggcaaggtg
tactggctcaagacctacgagattccggaagcgtcccgcgccgcccgtggtcgtccgctg
gtcaacctgttgccgttgagcgagggtgaatacatcaccaccatgctgccggtcgatctc
gaagccatgaagcgtcaggctgatgaagaagaagccgaaggcgccgaggctgatgttgaa
gaaatcgaaaacagcaacgagaccgacgaagagcgtcgcgctcgcatcaaggctgctgac
cgcaagaaagcaccgttcatcttcatgtcgaccgccaacggtaccgtgaagaagactccg
ctggtggccttcagccgtcagcgcagcgtcggtctgatcgcgctggaactggacgaaggc
gacatcctgatctccgccgccatcaccgatggcgagcaggaaatcatgctgttctccgac
ggcggcaaagtgacgcgcttcaaggaatccgaagttcgcgccatgggccgtaccgcccgc
ggtgtgcgtggtatgcgtctgccggaagggcaaaagctgatctccatgctgattccggaa
gaaggcagcgagattctcaccgcttccgagcgcggctacggcaagcgcacggccatcacc
gagttccctgaatacaagcgtggtggtcagggcgttatcgccatggtcagcaacgagcgt
aacggccgtctggtcggtgcggttcaggtgcaggacggtgaagaaatcatgctgatctcc
gatcagggcactctggtacgtacccgtgtcgacgaagtgtcgagcctgggtcgtaacact
caaggtgtgacgctgatcaagctggccaaggatgaaaccctggtcggactggagcgggtt
caggaaccttcggaagtcgaaggtgaagagcttgagggtgaagagggtgaggaattcgaa
ggcagcgtcgtgatcgacgatgctggcgaagaccagcaactcgacgccgcagcagacgaa
gaaccgcaagaataa
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