Pseudomonas sp. RU47: CCX46_22020
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Entry
CCX46_22020 CDS
T11150
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
psru Pseudomonas sp. RU47
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psru03009
]
CCX46_22020
Enzymes [BR:
psru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CCX46_22020
Ribosome biogenesis [BR:
psru03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CCX46_22020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
TRAM
MTS
Methyltransf_11
Cons_hypoth95
PCMT
Methyltr_RsmB-F
Methyltransf_23
RrnaAD
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_4
DREV
Ubie_methyltran
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AZZ77714
LinkDB
All DBs
Position
complement(4926885..4928261)
Genome browser
AA seq
458 aa
AA seq
DB search
MAKHERGLRFQPTGGSKVAQIPTGKKQRLSIERLANDGRGIAFFEGKTWFVLGALAGEEV
EARVLGAHGKVVEARTERVFKASELRRPAPCQHAGRCGGCSVQHLPHSEQLALKQRMLAE
QLSRVAGVEPEQWAAPLTGPEFGYRRRARIAVRWDMKAKKLEVGFRAAGSQDIVAISECP
VLVQPLQPIMTRLPEMLRRLSKPQALGHVELFSGSSLAVLLRHMAPLSEADLTILKDFCQ
FHEAQLWLHGEGEPQPVDATQSLGYRLEQWDLDLAYRPGDFIQVNAGVNEAMVAQALDWL
KPGRDERVLDLFCGLGNFALPLAKAVREVVAVEGVQTMVDRAEANAASNNLHNTKFFQAD
LSQPLTDAQWIGNGFSAVLLDPPRDGAFEVVRKLATLGAKRLVYVSCNPATLARDTVELI
KQGYRLKRAGILDMFPQTAHVEAMALFEASQDGSSESV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcacgagagaggcctgcgcttccagcccaccggcggcagcaaggttgcgcaa
attccgaccggtaaaaagcagcgcttgagcattgagcgcctggccaatgacggtcgcggt
atcgcgtttttcgaaggcaaaacctggttcgtcctcggcgccctggccggtgaagaggtc
gaagcgcgggtgctcggcgcccacggcaaagtggtcgaggcgcgcactgagcgcgtgttc
aaagccagcgaactgcgtcgcccggcaccgtgtcagcacgccggccgttgcggcggttgc
agcgtccagcatttgccccacagcgaacagcttgccctgaaacagcgcatgctcgccgag
caattgtcgcgtgtggccggtgtcgaacctgaacagtgggcagcgccgctgaccggtccc
gaattcggctatcgccgtcgcgcccggattgcggtgcgctgggacatgaaggcgaagaaa
ctcgaagtgggtttccgtgccgccggcagtcaggacatcgtcgcgatcagcgaatgcccg
gtgctggtacagcccttgcaaccgatcatgacccgtttgcctgagatgctccgccgtttg
agcaagccgcaggctttgggccatgtcgagttgttcagtggctcgtctctggcggtgttg
ctgcggcacatggcgccgttgtccgaagcggatctgaccatcctcaaggacttctgccag
ttccatgaagcgcaattgtggctgcatggcgaaggtgagccgcaaccggtcgatgccacc
cagtcgctgggctatcgcctggagcagtgggatctggatctggcgtaccgaccgggtgac
ttcattcaggtcaatgccggtgtcaacgaagcgatggttgcacaggcgctggactggctg
aagccgggtcgcgacgagcgcgtgctcgatctgttctgcggcttgggcaacttcgccttg
ccgttggccaaagccgtgcgcgaagtcgtcgcggtcgagggtgtgcaaaccatggtcgat
cgcgctgaagcgaacgccgccagtaacaatttgcataacacaaagttttttcaagccgat
ttatcccagcctttgaccgatgcccagtggatcggaaacggcttttctgcggtactcttg
gacccaccgcgtgacggtgctttcgaggtggttcgcaagctggcgaccctgggtgccaaa
cggttggtgtacgtatcgtgcaaccctgcaactctggcgcgcgatacggtcgaattgatc
aagcagggctaccggttaaaacgtgccgggattctcgatatgtttcctcagacggcacat
gtcgaggccatggcgttatttgaagcgagccaggatggctcgtctgaatccgtctga
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