Pseudomonas sp. RU47: CCX46_25345
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Entry
CCX46_25345 CDS
T11150
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
psru Pseudomonas sp. RU47
Pathway
psru00550
Peptidoglycan biosynthesis
psru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CCX46_25345 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psru01003
]
CCX46_25345 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psru01011
]
CCX46_25345 (mrcB)
Enzymes [BR:
psru01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CCX46_25345 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CCX46_25345 (mrcB)
Glycosyltransferases [BR:
psru01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CCX46_25345 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
psru01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CCX46_25345 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP_1A_C
Motif
Other DBs
NCBI-ProteinID:
AZZ78322
LinkDB
All DBs
Position
complement(5663362..5665686)
Genome browser
AA seq
774 aa
AA seq
DB search
MTRTRSPRTKKKPPSKGLSPWLSWAIKLSLVGLVVLAGFAVYLDAVVQEKFSGKRWTIPA
KVYARPLELFVGQKLSKDDFLTELDALGYRREAVSNGPGAAAVSGNTVDLNTRGFQFYEG
LEKPQPVRVRFSGDYVAELSATNGSKLSVVRLEPLMIGGIYPKNLEDRILIKLDQVPPYL
LETLIAVEDRDFYSHWGVSPKSIARAVWVNTSGGKMTQGGSTLTQQLVKNFYLTNERSLS
RKLTEAMMAMLLELHYDKKEILEAYLNEVFVGQDGQRAVHGFGLASQFFFGQPLSELKLH
QVAMLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVEAAKKMPLGVTTRG
KLADSSFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASVNDTFKRLSGR
KGSDDVEAAMVVTNPETGEVQAMIGSRQASYAGFNRALDAVRPIGSLIKPAVYLTALEKP
SQYTLTSWLSDDPLSVKGANGQVWKPQNYDRRSHGTVFLYQGLAHSYNLSTSRLGLEVGV
PNVLKTLGRLGVTREFPAFPSMLLGAGGMTPIEVATMYQTLANGGFNTPMRGIRSVLTAE
GEPLKRYPFQIEQRFDPASIYLIQNAMQRVMREGTGSSVYNVLPKTLTLAGKTGTSNDSR
DSWFAGFSQDLLAVVWLGRDDNGKTPFTGATGALQVWTSFMRKADPLPLDMPQPDNVVQA
WVDSRTGQGSDANCPGAVQMPYIRGSEPPPGAACASETPASGESVMDWVKGWMN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaactcgatccccccgtaccaagaaaaaaccaccctccaagggcctcagccca
tggttgagctgggccattaaactcagtctggtcggccttgtggtgctggccggcttcgcc
gtttacctcgatgccgtggtgcaggagaagttctccggcaagcgctggaccatcccggcc
aaggtttacgcgcggccgctcgagctgttcgtcggacaaaagctcagcaaggacgacttc
cttaccgaactcgatgccctcggctatcgccgcgaagccgtgagcaatggccccggcgcc
gcagccgtcagtggcaatacggtcgatctgaatacccgtggcttccagttctatgaaggc
ctggaaaaaccgcagccggtgcgcgtgcgtttctctggtgattacgtcgctgagctgtcg
gcgaccaacgggtcgaagctgtccgtggtgcgccttgaaccgctgatgatcggcggcatt
tatccgaaaaatctcgaagaccgcattctgatcaaactcgatcaggtgccgccgtatctg
ctcgaaaccctgatcgctgtcgaagaccgcgacttttatagccactggggcgtgtcgccg
aagtcgattgcccgcgcagtctgggttaatacctctggcggcaagatgacgcagggcggc
agtacgctgacccagcagttggtgaaaaacttctacctgaccaacgaacgcagcctgagc
cgcaagctcaccgaagcgatgatggcgatgctgctggaactgcattacgacaaaaaggaa
atccttgaggcctacctcaatgaagtctttgtcggccaggacggtcaacgtgcggtgcac
ggcttcggtctggccagccagttcttctttggccagccattgtccgagctgaagctgcat
caggtggcgatgctggtcggcatggtcaaaggtccgtcctactacaacccgcgtcgcaat
cctgagcgcgcgctggagcggcgtaacctggtgctcgatgtgcttgagcagcaaggcgtg
gcgacggccgaacaggtcgaagcggcgaagaaaatgccactgggtgtgaccacgcgcggc
aagctcgccgacagctcgttccccggcttcatcgatctggtcaagcgccagttgcgtgaa
gactaccgcgacgaagacttgaccgaagaaggcctgcgcatcttcaccagcttcgacccg
atcctgcagatgaaagccgaggcgtcggtcaacgacacctttaagcgtctgtccgggcgt
aaaggctccgatgatgtcgaagcggcgatggtcgtgaccaatccggaaaccggtgaagtc
caggcgatgatcggcagccgtcaggccagttatgccggtttcaaccgcgcactggacgcg
gtgcggccgatcggttcgttgatcaaaccggcggtttatctgaccgcgctggaaaaaccg
agccagtacacactgaccagttggctgtccgacgatccgttgtcggtcaaaggcgcgaac
ggtcaggtgtggaaaccgcagaactatgaccgccgctcccacggtaccgtgttcctctat
caaggcctggcgcattcctacaacctgtcgacctcgcgtctgggtctggaagtcggcgtg
cctaacgtgctcaagaccttgggtcgtctgggcgtgacgcgtgagttcccggcattcccg
tcgatgttgctgggcgccggtggcatgaccccgatcgaagtcgcgaccatgtaccagacg
ctggccaacggtggtttcaatacgccgatgcgcgggattcgcagcgtgctgaccgctgag
ggcgaaccgctcaagcgttatcctttccagatcgaacagcgtttcgatccggcgtccatc
tatctgatccagaacgccatgcagcgcgtgatgcgtgaaggtaccggcagctcggtttat
aacgtgctgcccaagactctgacactggccggcaaaaccggtaccagtaacgattcccgt
gacagctggttcgccggtttcagtcaggacttgctggcagtggtctggctgggccgcgat
gacaatggcaagacgccgttcaccggtgccactggtgcgctgcaggtctggaccagtttc
atgcgcaaggccgatccgctgccgctggacatgccgcaaccggacaacgtcgtgcaggca
tgggtcgattcgcgtaccgggcagggctccgatgccaactgcccgggggcggtacagatg
ccgtatattcgcggcagcgaaccgccacccggcgctgcctgtgcaagcgaaacgcctgct
tccggcgagtcggtgatggattgggtcaagggctggatgaattaa
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