Pseudomonas sp. RU47: CCX46_25505
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Entry
CCX46_25505 CDS
T11150
Name
(GenBank) type II secretion system protein F
KO
K02653
type IV pilus assembly protein PilC
Organism
psru Pseudomonas sp. RU47
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psru02044
]
CCX46_25505
02035 Bacterial motility proteins [BR:
psru02035
]
CCX46_25505
Secretion system [BR:
psru02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
CCX46_25505
Bacterial motility proteins [BR:
psru02035
]
Pilus system
Pilus assembly proteins
CCX46_25505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
T4_gp9_10_N
WHD_UBR1
PASTA
DUF7420
Motif
Other DBs
NCBI-ProteinID:
AZZ78354
LinkDB
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Position
5700006..5701223
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AA seq
405 aa
AA seq
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MAVKAAKISIYAWEGTDRKGSKVTGELSGQNPALIKAQLRKQGISPGKVRKKSASLLSFG
KRIKAQDIALFTRQMATMMKAGVPLLQSFDIIGEGFENPAMRKLVDEVKQEVAAGNSFAT
ALRKKPQYFDELYCNLVDAGEQSGALDTLLERVATYKEKSERLKAKIKKAMTYPTAVVLV
AAVVTGILLVKVVPQFQSVFSGFGAELPAFTLMVISLSEFMQQWWWAILGALVAAIFGTR
HALKTSQALRDRKDTWLLKLPLVGTLMYKSAVARFARTLSTTFAAGVPLVEALDSVAGAT
GNVVFKRAVLRIRQDVSTGMQLNFSMRSTGVFPNMAVQMTAIGEESGALDEMLDKVAGFY
EEEVDNMVDNLTSLMEPFIMVVLGVIVGGLVVAMYLPIFQLGSAI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcaaggcagcgaaaatcagtatttatgcctgggaaggtacggacaggaaaggc
agcaaagtcaccggtgaactcagtggacagaatccggcactgatcaaggcccaactgcgt
aaacaggggatcagtcccggcaaggtacgcaaaaaatccgcgtcgttgttgagttttggc
aaacgcatcaaggcccaggacatcgccctgttcacccggcagatggcgaccatgatgaag
gccggcgtgccgttgctgcagtcgttcgacatcattggcgaaggcttcgaaaacccggcc
atgcgcaagctggtggacgaggtcaaacaggaggtcgcggccggtaacagcttcgccaca
gccctgcgcaagaagccgcagtatttcgacgagttgtattgcaacctggtcgatgccggc
gagcagtccggcgccctcgacacgctgctggaacgggtcgcaacctataaggaaaaaagc
gaacggctcaaggccaagatcaagaaagccatgacctaccccaccgccgtggtgttggtg
gcggcagtcgtgaccgggatcctgctggtcaaagtggtgccgcaattccagtcggtattc
tcggggttcggtgcagagctaccggccttcaccctgatggtgatcagcctttcggaattc
atgcagcaatggtggtgggcgattctcggcgcgctggtcgcggcgattttcggcacccgt
cacgcactgaaaacctcccaggcgctacgtgatcgcaaagacacctggctgttgaaactg
cccttggtcggcacgctgatgtacaagtcagcggtagcccgcttcgctcgaaccctgtcg
accacgtttgctgccggtgtgccattggtggaagcgctcgactcggtggccggcgctacc
ggcaatgtggtgttcaagcgtgccgtgctgcgcattcgccaagacgtctccaccggcatg
cagctgaatttttcgatgcgcagcaccggagtctttcccaacatggccgtgcagatgacc
gcgattggcgaagagtcgggggcgctagatgaaatgctcgacaaggttgcaggcttttac
gaagaagaagtggataacatggtcgataacctcaccagcctcatggagccgttcatcatg
gtcgtgctgggggtgatcgtcggcgggctggtggtggccatgtacctgccgattttccaa
ctcggctcagcgatctga
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