Pseudomonas sp. RU47: CCX46_25615
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Entry
CCX46_25615 CDS
T11150
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
psru Pseudomonas sp. RU47
Pathway
psru02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CCX46_25615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psru02022
]
CCX46_25615
02035 Bacterial motility proteins [BR:
psru02035
]
CCX46_25615
Two-component system [BR:
psru02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
CCX46_25615
Bacterial motility proteins [BR:
psru02035
]
Pilus system
Twitching motility proteins
CCX46_25615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
HTH_50
HTH_30
AAA_16
Pre_tape_measure
VpsR
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
AZZ78371
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All DBs
Position
5717570..5718916
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AA seq
448 aa
AA seq
DB search
MNTSPRQKILIVDDEPDIRELLEITLGRMKLDTYSARNLTEAQALLHRETFDLCLTDMRL
PDGTGLELVQHIQQRYPQLPVAMITAYGSLETAINALKAGAFDFLTKPVDLTRLRELVGT
ALRMPAAGGSSTSIDRRLLGDSAPMRNLRKQIDKLARSQAPVYISGESGSGKELVARLIH
EQGPRASQPFVPVNCGAIPSELMESEFFGHRKGSFTGAVEDKPGLFQAAHGGTLFLDEVA
DLPLSMQVKLLRAIQEKAVRSVGGQQESVVDVRILCATHKDLDAEVAAERFRQDLYYRLN
VIELRVPSLRERRDDIEVLAAHMLKRLAKDTGQPAARLHPQALEALKNYRFPGNVRELEN
VLERAHTLCENRTIEAEDLRLSEGNCAADGGIADLTQIDNLEDYLENVERKLILQALEET
RWNRTAAAQRLSLSFRSMRYRLKKLGLD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttgaacacgagcccacggcaaaaaatcctcatcgtcgacgacgaaccggacatccgcgaa
ctcctggaaatcaccctgggacggatgaaactcgacacctacagcgcgcgcaatctgact
gaagcccaggcgctgttgcatcgcgaaacattcgacctgtgcctgaccgacatgcgtctg
cccgacggcacgggactggaactggtgcagcacattcagcagcgttatccacaactgcca
gtggcgatgatcaccgcctatggcagcctggaaacggcgatcaacgccttgaaagcaggc
gcattcgactttcttaccaaaccagtggacctcactcgcttgcgcgaactggtcggcacg
gcactacgcatgccggcggcgggcggcagctccacctcgattgatcgacgcttgctcggc
gattcagcgccgatgcgcaacctgcgcaaacagatcgacaaactcgcccgcagccaggca
ccggtgtacatcagcggcgaatccggcagcggtaaagaactggtcgcgcgactgatccac
gaacaggggccgcgcgccagccagccgttcgtaccggtgaactgcggggcgattccctcg
gagctgatggaaagcgagttttttggtcatcgcaaaggcagtttcaccggcgcagtcgag
gacaaacccgggctgtttcaggcggcccatggcggcacgttgtttctcgatgaagtggcg
gatttgccgctgtcgatgcaggtgaagttactgcgcgcgattcaggaaaaagccgtgcgc
agtgtcggcggccagcaggaaagcgtggtcgatgtgcggattctttgcgccacccacaag
gatctcgatgcagaggtcgcggccgagcgttttcgtcaggacctttattaccgcctgaac
gtgattgaattgcgcgtgccgtcgctgcgtgagcgccgtgatgacattgaagtgctggcg
gcacatatgctcaagcgtttggccaaggacaccggccaaccggcagcacgcttgcatccg
caggcgttggaagcgctgaagaactaccgctttccggggaatgtgcgggaactggagaac
gtgctcgaacgagcgcacaccctgtgtgaaaaccgcacgatcgaggctgaagatttacgt
ttgagtgaaggcaactgcgcggcggatggtgggattgccgatctgacccagatcgataat
ctggaagattatctggagaacgtcgagcgcaaactcatcttgcaggcgctggaggagacg
cgctggaatcgtacggcggcggcgcagcggttgagtctttcgttcagatcgatgcgctac
agactgaagaaattgggcctggattga
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