Pseudomonas sp. RU47: CCX46_26125
Help
Entry
CCX46_26125 CDS
T11150
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
psru Pseudomonas sp. RU47
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psru03009
]
CCX46_26125
Enzymes [BR:
psru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
CCX46_26125
Ribosome biogenesis [BR:
psru03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CCX46_26125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF8729
DUF8666
Motif
Other DBs
NCBI-ProteinID:
AZZ78470
LinkDB
All DBs
Position
complement(5824460..5825095)
Genome browser
AA seq
211 aa
AA seq
DB search
MSRPPRPPSRRPGAKPQSASPRRVAKAPPAEPKLVLFNKPFDVLTQFSDGEGRATLKDYI
DVPGIYPAGRLDRDSEGLLLLTNDGQLQARIADPKHKLAKTYWVQVEGVPTAEQLQRLRD
GVELNDGMTLPAEARQLDEPELWPRNPPVRFRATIPTSWLELVIREGRNRQVRRMTAAVG
LPTLRLVRVRIGDWTLEGLDQGQWKEVPARL
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcccccgcgtccaccttcccgccgccctggcgcgaagcctcagtctgcttcc
ccgcgccgtgttgccaaggcacccccggccgagccgaaactggtcctgttcaataagccg
ttcgatgtgctgacgcagttcagcgacggcgaagggcgggcgacgctcaaggattacatt
gatgtgcccggcatatatccggccggacgcctggatcgtgacagtgaaggcttgttgctg
ctgaccaacgacgggcagttgcaggcgcgcatcgccgatccgaaacacaaattggcgaag
acctattgggtgcaggttgaaggtgtgccgacggccgaacagctgcagcgtttgcgtgac
ggcgttgagcttaatgacggcatgaccttgcccgccgaagcgcgacaactggatgagcct
gagttgtggccgcgcaatccgccggtgcgctttcgcgcgaccataccgacttcgtggctg
gaactggtgattcgcgaagggcgcaaccgtcaggtgcggcgcatgaccgcggcggtcggt
ctgccgacgttgcggctggtgcgggtcaggattggcgactggacgcttgaaggcctcgat
cagggccagtggaaggaagtgccggcgcgcttatag
DBGET
integrated database retrieval system
