Pseudomonas sp. RU47: CCX46_27075
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Entry
CCX46_27075 CDS
T11150
Name
(GenBank) transcriptional regulator Crp
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
psru Pseudomonas sp. RU47
Pathway
psru02020
Two-component system
psru02024
Quorum sensing
psru02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CCX46_27075
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CCX46_27075
02025 Biofilm formation - Pseudomonas aeruginosa
CCX46_27075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psru03000
]
CCX46_27075
Transcription factors [BR:
psru03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
CCX46_27075
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MarR_2
TrmB
MarR
HTH_11
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AZZ78639
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Position
6012502..6013146
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AA seq
214 aa
AA seq
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MVAITPTPKIKNLDKLLMHCQRRRHAAKSNIICAGDRSDTLYFIIKGSVTILIEDDDGRE
MIIAYLNAGDFFGELGLFEQAGQEQERSAWVRAKVECETAEISYAKFRELSQQDPDILYV
LSGQIAQRLRNTTRKVGDLAFFDVTGRVARCLLELCKQPDAMTHPDGMQIKVTRQEIGRI
VGCSREMVGRVLKDLEERNLVDVKGKTMVVFGTR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggttgctattacccccacacccaaaatcaagaacctcgacaagctgctgatgcattgt
cagcgccgtcgtcatgcagccaaaagcaacatcatctgtgcgggcgatcgttcggacacg
ctgtacttcatcatcaagggctcggtaacgatcctgatcgaggacgacgacggtcgtgaa
atgatcatcgcctacctcaatgccggggatttcttcggtgagctgggtctgttcgaacaa
gccggccaggaacaggaacgcagtgcctgggtgcgggccaaggtcgaatgcgaaacagcg
gaaatcagttacgccaagttccgcgaattgtcgcagcaggatccggacattctttacgtc
ctcagcggacaaatcgcacaacgcctgcgcaacaccacacgcaaggttggcgatctggcg
ttcttcgacgtcactggccgggtagcacgttgtctgctggaactgtgcaagcagccagat
gcgatgacccacccggacggcatgcagatcaaggtgacgcgtcaggagatcgggcggatt
gtcggttgttcgcgggagatggtcggtcgcgtgctcaaggatcttgaggaacgcaacctg
gtcgatgtgaaaggcaagaccatggtggtcttcggtacgcgctaa
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