Pseudomonas sp. RU47: CCX46_27580
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Entry
CCX46_27580 CDS
T11150
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psru Pseudomonas sp. RU47
Pathway
psru00260
Glycine, serine and threonine metabolism
psru00460
Cyanoamino acid metabolism
psru00630
Glyoxylate and dicarboxylate metabolism
psru00670
One carbon pool by folate
psru00680
Methane metabolism
psru01100
Metabolic pathways
psru01110
Biosynthesis of secondary metabolites
psru01120
Microbial metabolism in diverse environments
psru01200
Carbon metabolism
psru01230
Biosynthesis of amino acids
psru01240
Biosynthesis of cofactors
psru04981
Folate transport and metabolism
Module
psru_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CCX46_27580 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CCX46_27580 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CCX46_27580 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CCX46_27580 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CCX46_27580 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CCX46_27580 (glyA)
Enzymes [BR:
psru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CCX46_27580 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AZZ78735
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Position
complement(6125946..6127199)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALIQPGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGINTDTGLIDYDEVERLAVESKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAQAMAS
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCEVLAGWICDILDNLGDADVEANVAQQVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggcgatgaat
gccgaggagcaacgtcaggaagatcacatcgagctgatcgcgtcggagaactacaccagc
aaacgcgtgatgcaagcgcaaggcagcggcctgaccaacaaatacgccgaaggctatccg
ggcaagcgctactacggtggctgcgagcatgtggataaagttgaagcactggccatcgaa
cgcgccaagcaactgttcggcgccgattacgccaacgtccagccacactccggttcatcg
gccaacagtgctgtttacctagcgctgatccagccgggcgacaccatcctcggcatgagc
ctggcccacggcggtcacctgacccacggcgccaaagtgtcgtcctcgggcaagctctac
aacgcggtgcagtacggcatcaacactgacaccgggctgatcgattacgacgaagtcgag
cgtctcgccgtcgaatccaagccgaaaatgatcgtcgccggtttctccgcttactcgaag
acgctggacttcccgcgcttccgtcagatcgctgacaaggtcggcgcgctgctgttcgtc
gacatggcccacgtcgccggtctggttgccgccggtctgtacccgaacccgctgccgtac
gccgacgtggtcaccaccaccacccacaaaaccctgcgcggtccacgtggcggcttgatc
ctggccaagtccaacgaagagatcgagaagaagctcaacgctgccgtattccccggcgct
cagggtggcccgctgatgcacgtcatcgccggtaaagccgtgtgcttcaaggaagcgctg
gagccaggcttcaaggcttatcagcagcaagtgatcgacaacgctcaggcgatggccagc
gtgtttatcaaacgtggctacgatgtagtgtccggcggtaccgataaccatttgttcctg
gtcagcctgatccgtcagggcctgaccggcaaagatgccgacgccgccctcggccgtgca
cacatcaccgtcaacaagaacgccgtgccgaacgacccgcaatcgccgttcgtgacctcg
ggcctgcgcatcggcaccccggcggtcaccacccgtggcttcaaggtgacccagtgcgaa
gtgttggcgggctggatctgcgacatcctcgacaacctcggcgatgccgatgtcgaggcc
aatgttgcccagcaagtgtcggccctgtgcgcagacttcccggtttatcgctga
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