Pseudomonas sp. RU47: CCX46_28420
Help
Entry
CCX46_28420 CDS
T11150
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
psru Pseudomonas sp. RU47
Pathway
psru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCX46_28420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psru03019
]
CCX46_28420
Messenger RNA biogenesis [BR:
psru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CCX46_28420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
AZZ79416
LinkDB
All DBs
Position
complement(6306114..6306593)
Genome browser
AA seq
159 aa
AA seq
DB search
MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPEETPEDALYRELNEEVGL
EREDVEILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLISNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLARD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaccccgatggtttccgccccaatgtcgggatcattctgacgaatgacgccggc
caggtgctatgggctcgccgtatcaatcaagatgcctggcagtttccgcaagggggaatc
aaccctgaagagacgccggaagacgccttgtaccgcgagctgaacgaagaagttggcctg
gaacgtgaagatgttgaaatactggcctgtactcggggctggttgcgctatcgtttgccg
caacgtctggtgcgtacgcacagccaaccgctgtgcatcggccagaaacagaaatggttt
ctcctgcgcctgatctccaacgagcagcgggtgcggatggatttgaccggtaaaccggag
ttcgatggctggcgctgggtcagctattggtatccgttgggccaggtggtgacattcaag
cgcgaggtgtatcgccgcgccctcaaagagcttgccccgcgccttttagcgcgcgactga
DBGET
integrated database retrieval system
