Pseudomonas sp. RU47: CCX46_28990
Help
Entry
CCX46_28990 CDS
T11150
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psru Pseudomonas sp. RU47
Pathway
psru00300
Lysine biosynthesis
psru00470
D-Amino acid metabolism
psru01100
Metabolic pathways
psru01110
Biosynthesis of secondary metabolites
psru01120
Microbial metabolism in diverse environments
psru01230
Biosynthesis of amino acids
Module
psru_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CCX46_28990
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CCX46_28990
Enzymes [BR:
psru01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CCX46_28990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AZZ79005
LinkDB
All DBs
Position
6420604..6421434
Genome browser
AA seq
276 aa
AA seq
DB search
MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKGGIIELDVRNDGQIGVNM
GAPRLVPADIPFEAPAQAISYQLEVDGTTVELAAVSMGNPHAVLRVQDINSAPVHELGPK
IEHHPRFPARVNVGFLQVIDRNRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVLMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttactaaaatgcacggcttgggcaatgacttcatggttctcgacctg
gtcagccagcacgcgcacattcagccaaaacacgccaagcaatggggcgatcggcacacc
ggtatcggtttcgaccagttgctgatcgtcgaggcgccgagcaacccggacgtggatttc
cgttaccggatcttcaattccgatggctcggaagtcgagcaatgcggcaacggcgcgcgc
tgctttgcgcgcttcgtgctcgacaagcgtctgaccgccaagcggcagatccgcgtcgag
accaagggcggcatcatcgaactggacgtgcgtaacgacggccagatcggtgtgaacatg
ggcgctccgcgtctggtgccggcggacattccgttcgaagcgccggcgcaggccatcagc
tatcagctggaagtcgacggcaccaccgtcgaactggccgccgtgtcgatgggcaacccg
cacgcggtattgcgcgtgcaagacatcaacagcgcaccggtgcatgaactggggccgaaa
atcgaacaccatccgcgcttccccgcgcgagtgaacgtcggttttctccaggtcatcgac
cgtaaccgcgcgcaattgcgcgtgtgggaacgcggtgccggggaaacccaggcctgcggt
accggcgcgtgtgcagcggctgtcgctgcgatcagccaggggtggatggattcgccgcta
ttgatcgacctgcccggcgggcgtctgtccattgaatgggcaggccctggccaaccggta
ctgatgaccggtccggcagtgcgtgtatacgaaggacaagtacgtctttga
DBGET
integrated database retrieval system