Pseudomonas sp. RU47: CCX46_29725
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Entry
CCX46_29725 CDS
T11150
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psru Pseudomonas sp. RU47
Pathway
psru03420
Nucleotide excision repair
psru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCX46_29725
03430 Mismatch repair
CCX46_29725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psru03400
]
CCX46_29725
Enzymes [BR:
psru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCX46_29725
DNA repair and recombination proteins [BR:
psru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCX46_29725
MMR (mismatch excision repair)
Other MMR factors
CCX46_29725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AZZ79145
LinkDB
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Position
6589911..6592094
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AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLYLATMRGIYEAYE
AACQRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLGK
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDSVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGDGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIRDHARHSDVSMWEAMRQLVANKGLTGRAAGALGAFIELIENLAAKCMEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFENTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSISRPFGGNQ
SMSGSNLFSGSEIPETGFSLGQAVRHSIFGDGVILNFEGAGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttctgctgaattccctcaacgatgcccaacgccaggccgta
gcagcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcctcgccccactccatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgtcatcgcatcgagcagttgctg
gggatcaacccggccggcatgtgggtcggcaccttccacggcttggcgcaccgcttgctg
cgggcgcactggcaggaagcgggcctgagccagaccttccagattctcgacagcgacgac
cagcaacggctggtcaagcgggtgatccgcgagctgggtctggacgaacaacgctggccg
gcccgtcaggcgcagtggttcatcaatggccagaaagacgagggtctgcgcccgcaacac
attcaggccagcggcgatttgtacctggcgaccatgcgcggcatttacgaagcctacgag
gcggcgtgccagcgtgccggcgtcatcgacttctccgaactgctgctgcgcgccctcgat
ctgtggcgcgatcacccgggcctgctcgcgcactaccagaagcgcttccgccacattctg
gtggacgagttccaggataccaacgccgtgcagtacgcctggttgcgcctgctcggcaag
ggcggcgacagcctgatggtggtcggcgacgacgaccagtcgatttacggctggcgcggc
gcgaagatcgagaacattcatcagtactcctctgacttcccggattcggtgaccattcgt
ctggagcagaactaccgctccaccgccggtatcctcaaggctgccaacgccttgatcgcc
aataacaccggtcgtctcggcaaagagctgtggaccgacggcggtgatggcgaagcgatc
aatctgtacgccgcgttcaacgaacacgacgaagcgcgctacgttgtcgaaaccatcgaa
agcgcgctgaaaaccggcttggcgcgcagcgatatcgcgattttgtaccgctccaacgcc
caatcacgcgttctggaagaagctttgctgcgcgaacgcattccgtatcgcatctatggt
ggtcagcgcttcttcgagcgtgcggaaatcaagaacgccatggcctacctgcgtttgctt
gaaggtcgcggcaacgatgcggcgctagaacgcgtaatcaacgtgcccgcccgtggcatc
ggcgagaaaactgtcgaagccatccgtgatcacgcgcgccacagcgatgtgtcgatgtgg
gaagcgatgcgccaactggtcgccaacaaaggcctgaccggtcgggcggccggtgccctg
ggtgcgtttatcgaactgatcgaaaacctcgccgccaagtgcatggaaatgccgctgcac
ctgatgacgcaaaccgtcatcgagcaatccggcctgattgcttatcacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcgcgcaac
ttcgagaacactgaagaagacgaagaactgacgccactggcggcgttcctcggccatgct
tcgctggaggccggcgacacccaggccgacgagcatgaagacagcattcagctgatgacc
ctgcacagcgccaaaggcctggaattcccttacgtgttcctcgtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagagccgggacgtctggaagaagagcggcgcttg
gcttacgtcggcattactcgggcgatgcagaatctggtcatgacctatgccgagacccga
cgcctgtacggcagcgagacctacaacaaggtttcgcgtttcgtccgcgaagtgccgaag
gggctgattcaggaagtgcgcctgtcgaacagcatcagccgaccgttcggcggcaatcag
tcgatgagcggcagcaacctgttcagcggcagcgagattccggaaaccggcttcagcctc
ggtcaggcggtacgccattcgatctttggcgacggtgtgatcctcaactttgagggcgcc
ggtgcgcaggcgcgggtgcaggtgaacttcagcgaaggcagcaagtggctgatgctcggc
tacgccaagctggaagcgatctga
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