Pelodiscus sinensis (Chinese soft-shelled turtle): 102443540
Help
Entry
102443540 CDS
T02980
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pss04121
]
102443540 (PDZRN3)
Enzymes [BR:
pss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102443540 (PDZRN3)
Ubiquitin system [BR:
pss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
102443540 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
102443540
NCBI-ProteinID:
XP_006113893
Ensembl:
ENSPSIG00000005398
UniProt:
K7FCP9
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
MGCSLCTLQKQEEQYKLLYEVCQVNGKDLSKATHDQAVEAFKTAKEPIVVQVLRRTPRTK
IFSPSHESYLVDTGTQTDITFEHIMALTKMGSPPPAVSVLDPYLLPEDHSSVHEYYDPND
YMGGIHQEMDRDELELEEVDLHRVNSQDKLGLTVCYRTDDEDDIGIYVSEIDPNSIAAKD
GRLREGDRIIQINGIEVQNREEAVALLTSEESKNVSLLVARPEIQLDEGWMDDDRNDFLD
DLHMDMLEEQHHQAMQFTASILQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRND
ESSEQENNADDHTTSSNTLGSQKQLAYSHDTLGSGDMPFSNESFISADCTDTDFLSIPVD
ECERFRELLELKCQVKSANPYSLYYHNSASDISKSDHESVDRELEMLNEELRNIELECLN
IVRAHKMQQLKDQYREPWMLHNSGFRNYNTTIDARRHELSDITELPEKSDKDSSSAYNTG
ESCRSTPLTLQISPENSLHRTVEGLSCQGNEGAGAYVSQKNLLPSSESHEASSAKYLSSP
KETDLGKQLESKERKASDGSKSPAQKLAGSYISPYHHSPYKHAHIPAHAQHYQSYMQLIQ
QKSAVEYAQSQMSLVSMCKDFNSSSQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERAI
KIKEERSGMTTDDDAISEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQG
VEEKKEMNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcagtttgtgtactctacagaagcaagaagagcagtacaaattattgtatgaa
gtttgtcaggtaaatgggaaagatttatctaaagcaacacatgaccaggcagttgaagca
ttcaaaacagccaaagagcccatcgtggtgcaggtcctgaggagaaccccacgcactaag
atcttcagcccttctcatgagtcttatctggtagatacgggcacccagaccgatataacc
tttgaacatatcatggctctgaccaagatgggatcccctcctccagcagtctcagtacta
gatccatacctcttacctgaggatcattcatcggtgcatgaatactatgatccaaatgac
tacatgggaggcattcatcaagaaatggacagagatgagttagaattagaggaagtggac
ttgcatagagtgaacagccaggacaagctcggccttactgtgtgttatcgaactgatgat
gaagatgacattggtatttatgttagtgagattgatcccaacagcattgctgcgaaagat
ggtcgcctacgagagggagatcgcattattcaaattaatggcattgaggtgcagaaccga
gaagaagctgtggcacttctaaccagcgaagagagcaaaaatgtctccttacttgtagca
agaccagaaattcagctggatgaaggatggatggacgatgacagaaatgattttctggat
gacttacacatggacatgctggaggaacagcaccaccaggccatgcagtttactgccagc
atcctacagcagaagaagcatgaagaagatggcggcaccacagacacggccactatttta
tctaatcagcatgagaaggacagcggtgtgggacgcacagatgagagcacgcgaaatgac
gaaagctctgagcaggagaataatgccgacgatcacaccacttcctctaacaccctgggg
agccagaagcagctggcgtacagtcatgacactctaggaagcggtgacatgccgttcagc
aacgagtcgtttatctcggccgactgcacagacacagacttcctcagcatcccagtggat
gaatgcgagagattccgtgaactgctggagctgaagtgccaagtcaagtctgccaacccg
tacagtctatattatcataacagtgcctcggatataagtaagagtgaccacgagagcgtt
gacagggagctggagatgctgaatgaggagctgcggaatattgagctagagtgtctgaat
atcgtgagagctcacaaaatgcaacagctgaaagatcaataccgggagccctggatgctc
cataacagcggattccgtaactacaatacaaccattgatgcgcgcagacacgagctctca
gacattacagagctcccagagaaatctgacaaggatagctcgagtgcatacaacacaggt
gagagctgtcgaagcacaccgctcaccctgcaaatttcccctgagaattctctgcacaga
acagtagaaggcctcagctgtcaaggtaatgagggggcaggggcatatgtctcccagaag
aatctgctccctagctcagaaagtcacgaagccagctctgctaaatatctctcgtcccct
aaagagacggaccttggcaagcagctggaaagcaaagagcgaaaagccagtgatggaagc
aaaagcccagctcaaaaactggctggctcctacatctctccatatcatcactctccctat
aaacacgctcatatcccagcccacgctcagcactaccagagctacatgcagctgatacaa
cagaagtcagctgtggaatatgcacagagccagatgagtctagtgagcatgtgcaaagac
ttcaattcgtcaagccaaagcgagccccggatggaatggaaagtcaaggtcaggagcgat
ggaacccgctacatcaccaagaggccagtcagggacaggctactgagagaacgtgccata
aagattaaggaagagcgcagcgggatgacgacagatgacgacgctataagtgagatgaaa
atgggccgctattggagcaaggaggaacggaagcagcatttggtgaaagcgaaggaacag
aggcggcgacgcgagtttatgatgcagagcaggttagattgtttaaaggaacagcaaggg
gtggaagaaaagaaagagatgaacatcattgaactgagccacaaaaaaatgatgaagaag
aggaataaaaaaatctttgacaactggatgacaatccaagaactcttaactcatggcaca
aagtcccccgatggcacaagagtgtacaattctttcctgtcagtaactactgtataa
DBGET
integrated database retrieval system
