Pelodiscus sinensis (Chinese soft-shelled turtle): 102443916
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Entry
102443916 CDS
T02980
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03015
mRNA surveillance pathway
pss04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102443916 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102443916 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pss03021
]
102443916 (SYMPK)
03019 Messenger RNA biogenesis [BR:
pss03019
]
102443916 (SYMPK)
Transcription machinery [BR:
pss03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102443916 (SYMPK)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
102443916 (SYMPK)
U7-dependent histone pre-mRNA processing factors
102443916 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
CRM1_C
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
102443916
NCBI-ProteinID:
XP_025043185
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MASGTGDGGNARLSIASQFFTQEEGSGTDSMTTSERVVDLLNQAALISNDSKITILKQVQ
ELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEAWEIIAFQADKSIEVRKFVIG
FIEEAWGPRASLARQRPMFMAEVIQAYETLHANLPPTLAKSQVSSVRKNLKLHLLSVLKH
PSSFEFQAQITTLLVDLGTQQAEIARSMPNLKEARKRPRDDTDPSLKKMKIEPSLGEDDE
DKDLEQTAVPPPKPSVQTSPLSDTDITAEFLQPLLTPDNVANLVLISMVYLPDTMPASFQ
ATYTPVESAGTEAQIKHLSRLMATQMTAAGLGPGMSAEGAERPLYGCTPPPRRHWHSPEQ
SQARADPCGTPLAVPFQLGMTRRPTLSCSLPPHSRLAGAGGRKKVFRLSDVIKPLTEQQG
DKLKLAAVKRILCSERAVACSGAAQARVKILASLVTQFGVPLKSEVMAFILDDVRNRLDL
AFAWLFHEYNAYLSKYPSGSLERYDECLLGLLSGLQEKPDQKDGIFTKLVLEAPLITESA
LEVIRKYCEDESRTALGMSTLQDLIFKRPSRQFQDLHVLLDLSSHEKDKVCPGASWVPPA
MLLSREISLARPCLAFSARPRRATRPASRPLHLVPVWELCAHVPPSLIRGMGMNSPELLL
LVENWHKGAETLVTRCLHSLTDPHPAPRPPAPPNGPCPPEGRWPAWASVSRSGLAVVMQQ
LMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNVLSRLIMKQVWKYPKVWEGFIKCCQRTKP
QSFQVILQLPPQQLSAVFEKCPELREPLLAHVRSFTPHQVPLPPRESRPGVGHKRGCLYQ
PLMEQELEPAPLLPRMSQDMIALRLAQEKALKRQLEEEQKLKQPASQPRPAHVLAPLPAE
EPMDFREERPEVETPTIFISVQEEEEGSGGDGSLLDSSAEGPPPAKEPKSKEAGAGSAAD
EEAESKPENLPPAEPAPSSTQPSGPQPPSQPEEQPEAGAGQEQKQKAES
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggccagcggcacaggggatggcggcaacgcccgcttgagcatcgcctcccagttcttc
acccaggaggagggcagcggcacggacagcatgaccacctcggagagggtggtggatctg
ttaaaccaggctgccttgatcagcaatgactctaaaatcaccatcctcaaacaggtccag
gagctaattataaacaaggaccccacgctgctggataacttcctggatgagatcatcgcc
ttccaggcggacaaatccatcgaggtgcgcaagtttgtcatcggcttcatcgaggaggcc
tgggagatcatcgccttccaggcggacaaatccatcgaggtgcgcaagtttgtcatcggc
ttcatcgaggaggcctggggtccccgggccagcctcgcccgccagcggcccatgttcatg
gccgaggtgatccaggcctacgagacgctgcacgccaacctgccgccgaccctggccaag
tcccaggtgagcagcgtgcgcaagaacctgaagctgcacttgctgagcgtgctcaagcac
ccctcgtccttcgagttccaggcgcagatcaccacgctgctggtggacctgggcacgcag
caggccgagatcgcccgcagcatgcccaacctgaaggaggcgcgcaagcgcccgcgggac
gacaccgatccctccctcaagaagatgaagatagagccgtcccttggggaggatgacgag
gacaaggacctggagcaaacggccgtgccgccgcccaagccctccgtccagacgagcccc
ctgtcggacacggacatcacggccgagttcctgcagcccctgctgacgccggacaacgtc
gccaatctggtgctgatcagcatggtgtacctgcccgacaccatgcctgcctccttccaa
gccacctacacccccgtggagtcggccggcacagaagcccagatcaagcatctctcccgc
ctcatggccacccagatgacagctgcagggcttggcccaggtatgtctgccgagggggcg
gagagacctctctatgggtgcaccccgcccccccgccggcactggcattcccctgaacag
agccaggccagagctgatccctgcgggaccccactcgctgtccccttccagcttgggatg
acgcgccgtccgacgctgagctgctccctccctccccactccaggctggcgggcgccggt
gggcgcaagaaggttttccgcctgagcgacgtgatcaagccgctgacggagcagcaaggg
gacaagctgaagctggcagccgtgaagcggatcctgtgctcggagagagccgtagcctgc
agcggggcggcccaggcccgggtcaagatcctcgcctccctggtgacccagtttggcgtg
cccctgaagagcgaggtcatggcctttatcctggacgacgtccgcaaccggctggacctg
gccttcgcctggctgttccacgagtataacgcctacctgagcaagtaccccagcggctcc
ctggagcgctacgacgaatgtctccttggcctgctctccggcctgcaggagaagccggac
cagaaggacgggatcttcaccaagttggtgctggaagccccgctcatcacggagagcgcg
ctggaggtgatccgcaagtactgcgaggacgagagccgcaccgccctggggatgtccacc
ctgcaggacctgatcttcaagcgcccgtccaggcagttccaggatctgcacgtgctgctc
gacctcagctcccacgagaaggacaaggtgtgtccgggggcctcctgggtccctcccgcc
atgctcctgtcaagggagatcagcctcgctcgtccctgcctcgccttctcggcccgcccg
cgacgtgcgacccgccctgcctcccgacctctgcacctagttcccgtgtgggagctgtgc
gctcacgttcctccttccttgatccgcgggatggggatgaattccccggagctgctgctg
ctggtggagaactggcacaaaggggctgagaccctggtgacgcgctgcctccacagcctg
acggatccccaccctgctcccagacccccggcccctcccaacgggccctgccctccagag
ggccgctggcctgcctgggcctcggtttcccgttcagggctggccgtggtgatgcagcag
ctgatggagcagagccccctgcccatgctgctcatgaggacggtcatccagtcgctgacc
atgtacccgcgcctgggcggctttgtcatgaacgtcctgtcccgcctcatcatgaagcag
gtgtggaagtaccccaaggtgtgggagggcttcatcaaatgctgccagcgcaccaagccc
cagtccttccaggtcatcctgcagctccctccgcagcagctcagcgccgtcttcgagaag
tgccccgagctgcgggagcccctgctggcccacgtccgctccttcaccccgcaccaggta
ccgctgcccccgcgggagagtcgccctggggtggggcacaagcgaggctgcctttaccag
ccgctgatggagcaggaactggaacccgcccccctcctcccgcgcatgtcccaggacatg
atcgccctgcggctggcccaggagaaggcgctcaaacggcagctggaggaggagcagaag
ctgaagcagccggccagccagccacgcccggcccatgtcctggcaccactgcccgccgag
gagcccatggacttccgggaggagaggcctgaggtggaaacacccaccatcttcatcagc
gtgcaggaggaagaggagggctccgggggagacgggtccctgttggactccagcgcggag
gggcccccgccggccaaggagccgaagagcaaggaggcgggagccggtagcgccgcggac
gaagaggccgagagcaagccagagaacctcccaccggctgagccagcgcccagcagcacc
cagcccagcgggccccagccgcccagccagccggaggagcagccagaggccggagcgggg
caggagcagaagcagaaagcggagagctga
DBGET
integrated database retrieval system
