Pelodiscus sinensis (Chinese soft-shelled turtle): 102443949
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Entry
102443949 CDS
T02980
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
KO
K08524
retinoid X receptor alpha
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03320
PPAR signaling pathway
pss04148
Efferocytosis
pss04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102443949 (RXRA)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
102443949 (RXRA)
03320 PPAR signaling pathway
102443949 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pss03000
]
102443949 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pss03310
]
102443949 (RXRA)
Transcription factors [BR:
pss03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
102443949 (RXRA)
Nuclear receptors [BR:
pss03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
102443949 (RXRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
102443949
NCBI-ProteinID:
XP_006136673
Ensembl:
ENSPSIG00000011977
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MDTKHFLPLDFSTQVNSTSLNSPSGRGPMAAPSLHPSIGPGIGSSGQLHSPISTLSSPIN
GMGPPFSVISSPMGPHSMSVPSTPTLGFGTGSPQLSSPMNPVSSTEDIKPPLGLNGVLKV
PAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLI
DKRQRNRCQYCRYQKCLAMGMKREGMEHHPSRPTRLLGSQDEQAVQEERQRGKDRNENEV
ESTSSANEDMPVEKILEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLV
EWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSA
GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASL
EAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQ
MT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacatttcctgccactggatttttctactcaagtcaattccacgtccctg
aactccccgagtggccgggggcctatggccgcaccttccctccatccatccatcgggcca
ggcatcggatcctccggtcagcttcattcgcccatcagcactctgagctcccccatcaat
ggcatgggcccccctttctccgtcatcagctcccccatggggcctcactcaatgtctgtc
ccgtcaactcccacccttggatttggaactggcagcccacagctcagttctcctatgaac
cccgtcagcagcacagaagacattaaaccgcccttgggactcaatggagttcttaaagtg
ccagcacacccctccggaaccatggcctccttcaccaagcacatatgcgccatctgtggg
gacagatcttcaggtaaacattacggggtgtacagctgcgagggctgcaaaggtttcttc
aagcgcactgtgcggaaggacctcacctacacctgccgcgacaacaaggattgcttgatt
gacaagcgccagcggaaccggtgccagtactgccggtatcagaagtgtctggctatgggc
atgaagcgagaagggatggagcaccatccatcccggcccacaagacttctgggaagccaa
gacgaacaagctgtgcaggaggagaggcagcgagggaaggaccgaaatgagaacgaggtg
gagtcgacaagtagcgccaatgaggacatgcccgtggagaagatcttggaagccgaactc
gcagttgagccaaagacagagacttacattgaggcaaatatgggcttgactcctagctcg
cctaatgacccggtaaccaacatatgccaagcagcagacaaacagctcttcaccttggtg
gaatgggcaaagcgaattccccatttttcagaactgcccttggatgaccaagtcatctta
ctcagagcaggctggaatgagcttctaatcgcctccttctcccaccgttccatagctgtg
aaagacgggatcctcctagccaccggcctccatgtgcatcggaacagcgctcacagcgca
ggggtcggcgccatcttcgatagagtactgacagaactcgtgtcaaaaatgcgagacatg
cagatggacaagacggagctgggctgcctgagagccatcgtcctcttcaacccagactca
aaagggctttccaaccccgcggaggtggaggcgttgcgcgagaaggtgtacgcgtcgctg
gaggcctattgcaaacacaaataccccgaccagcctggaaggtttgcaaagctcttgctt
cgtctccctgccctgcgatccattggcctgaaatgcctggagcacctgttcttcttcaag
ctcataggagatacgcccatcgacaccttcttgatggagatgctggaagcaccccaccag
atgacttag
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