Pelodiscus sinensis (Chinese soft-shelled turtle): 102443958
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Entry
102443958 CDS
T02980
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pss03037
]
102443958 (IFT88)
Cilium and associated proteins [BR:
pss03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
102443958 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_12
TPR_6
TPR_7
TPR_19
TPR_14
TPR_16
ANAPC3
TPR_17
TPR_11
TPR_CcmH_CycH
ARM_TT21_4th
TPR_9
ARM_TT21_5th
TPR_10
TPR-S
ARM_TT21
TPR_15
HAT_PRP39_C
ARM_TT21_2nd
DUF6584
Consortin_N
Coatomer_E
ARM_TT21_C
NBD_SMAX1
TPR_21
Motif
Other DBs
NCBI-GeneID:
102443958
NCBI-ProteinID:
XP_006138917
Ensembl:
ENSPSIG00000006089
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MMQNVHLAPKVDEDDLYSGYNDYNPTFDTEDLENDTAFQQAVRTSHGRRPPITAKIPGTS
ASRPLATGLGSKTALSSSMGRPMTGAIQDGVARPLTAVHAAGYTKTALRGSVFDPLGQAR
GPAPPLEMKNEDTPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERMLVR
QREQIASPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNGGRLKVNMA
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVAFIKTGQYTDGISSFEHIMN
TSPNLKAGFNLILCYFATGDREQMKKAFQKLIAVPLEIDYDDKYISPNDDPHTNLLIEAI
KNDQLRQMERERKSMAEKYIMTAAKLIAPAIETSFAIGYDWCVEVVKASHYVELANDLEI
NKAITYLRQKDFYQAVETLKMFEKKDSRVKSAAATNLSFLYYLENELVQATNYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNKLDEALD
CFLKLHAILRNSAQVLYQIASLYEIMEDPNQAIEWLMQLISVVPTDSHALSKLGELYDNE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIQPTQVKWQLM
VASCYRRSGNYQKALDTYKEIHRKFPENVECLRFLVRLCTDMGLKEVQEYATKLKRVEKL
KEIREQRVKSGRDGSARSRREGSGGGDSGGSAKGERLSAKLRALPGTNEPYESSGNKEID
ASYVDPLGPQTERPKTAARKRMDEDEFADEELGEDLLPE
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtccacctagcacccaaagtagatgaagatgatctttattctggctac
aatgactataaccccacctttgacacagaggatttagaaaatgacacagcttttcagcaa
gctgtgagaactagtcatggtagaagacccccaataacagccaaaattccaggtacatca
gcttcacgacctttagctactgggcttgggtcaaagacagcattatcatcatccatggga
agaccaatgacaggagccatacaagatggagttgctcgacctctgacagcagtgcatgca
gcaggttacactaaaacagctttgagaggatctgtttttgatcctcttggtcaagcaaga
ggtcctgctcctcctttagaaatgaaaaatgaagatactccagaagaaaagattagacag
ttagaaaaaaaagtgaatgagttggttgaagaaagctgcattgccaacagctgtggagac
ttaaaattggctctggaaaaggcaaaagatgctggaagaaaggaaagaatgttggtgagg
caacgtgaacaaattgcatctccagaaaacatcaacttagatcttacttattcagttctt
ttcaacttggccagccaatattctgctaatgaaatgtatgctgaagcactaaatacttat
caagtcatagtgaaaaataagatgttcagcaatggaggaagactgaaggtgaacatggca
aacatttatttaaaacaacggaactattcaaaagctatcaaattctatcgtatggcttta
gatcagattccaagtgtccataaagaaatgaggattaaaataatgcagaacattggagtt
gcattcattaaaactggtcagtacactgatggcattagttcatttgaacacataatgaac
acatctccaaacctgaaagcaggtttcaacttgatcctttgttattttgccactggagac
cgtgaacaaatgaaaaaagctttccaaaaactgatcgctgttccactggaaattgattat
gatgacaaatatatttcaccaaatgatgatccacatactaacctattgattgaagccatt
aaaaatgaccaactaaggcaaatggaacgtgaaaggaaaagcatggcagaaaaatatatc
atgacagctgctaaattgattgcaccagcaattgaaacctcctttgccataggctatgac
tggtgtgtcgaagtagtaaaagcttcccattatgtagaattagccaatgatctggaaata
aataaagcaattacatatttgaggcaaaaggacttctatcaggctgtagagactttaaaa
atgtttgaaaaaaaggatagcagagtaaaaagtgcagctgcaacaaacctctcattcctt
tattatttggagaatgaattagtacaagcaaccaattatgcagatttagctgtgaactct
gatagatacaacccatcagctctcactaataaaggaaatactgtgtttgcaaatggagac
tatgaaaaggcagcagagttttataaggaagctttaaggaatgattcttcatgcactgaa
gcactttacaatataggtttaacgtataaaaaattaaacaaactagatgaggctttggat
tgttttctgaaacttcatgcaatccttcgaaacagtgcccaagttctctaccaaatagca
agcttatatgaaataatggaggatcccaaccaagccatagaatggcttatgcagcttatc
agtgtagttccaactgattcacatgcactgtcgaaactaggggaattgtatgataacgaa
ggcgataaatcccaagcttttcagtattactatgagtcataccggtatttcccttcaaac
attgaggtcattgaatggcttggagcctattacattgatacccagttttgtgaaaaagcc
attcagtactttgagagagccgcacttattcaaccaacacaagtgaaatggcagttgatg
gtcgccagttgttatagaagaagtggtaactaccagaaagctctagatacatataaggag
attcacagaaaatttccagagaatgttgaatgtctacggtttttagttcgtctctgcaca
gatatggggctgaaagaagttcaagaatatgcaacaaagctcaagagagtagaaaagcta
aaagaaataagggaacagcgtgttaaatctggcagagatggcagtgcacgtagccgcaga
gaagggagtggtggcggggatagcggtggtagtgctaaaggggaacggctaagtgccaag
ctaagggctttgcctggaacaaatgagccctatgaaagcagtggcaataaagaaatagat
gcttcctatgtagatccacttgggccacaaacagagagaccaaaaactgcagcaagaaaa
agaatggatgaagatgagtttgctgatgaagagttaggagaggatttgcttccagaataa
DBGET
integrated database retrieval system
