Pelodiscus sinensis (Chinese soft-shelled turtle): 102443974
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Entry
102443974 CDS
T02980
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102443974 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pss04121
]
102443974 (NHLRC1)
Enzymes [BR:
pss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102443974 (NHLRC1)
Ubiquitin system [BR:
pss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102443974 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4
Baculo_IE-1
Prok-RING_4
RING_XB3-XBAT31
zf-RING_11
DUF4668
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
102443974
NCBI-ProteinID:
XP_006121878
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MSATASDKMQIMTELVSETEVSLLECKVCFEKYTQKKKHRPRNLPCGHVICLECVFSLAH
PRNFKLECPFCRRACKSSETSDCLPLLHLIEILSPAINTPLASGTTTGTGDEAAVSASLG
LTFNLSFGGWGTLVNPTGIAMCRRSGCIVVAHDGKKRIKLFGLNGSCIQQFGERGDAGND
IKYSLDVTVTLDGHVVVTDSGDRSVKVFDFNGRGKLVIRESFCLPWGLDTTPENEIILSD
PEAGALYRLTANFKKGELKKAQKIQSNLCNPREVAVSQTSGIIAIIEHLIAKGPNDSSTK
VKIFSADMKLIGQMDTFGLNLVFPSKVCATAVAFDGEGHIIVADAYNQAVLCLGKPEEFP
VLRPKVTQGLSYPVALTYTANNSLIVLDSGDHSIKVYTAS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccacggcctctgataaaatgcagattatgacagaactggtgagtgaaactgag
gtcagtcttcttgaatgcaaagtgtgctttgaaaaatatacccagaagaagaaacatcgg
ccgaggaacttgccctgcggacatgttatatgcttagagtgtgtattctctctagcacac
ccaagaaattttaaattggagtgccctttctgtcgaagagcttgcaaatcctctgagacg
agtgactgcttaccattgctgcacctgatagagatcttaagccctgcaattaatactcct
ttagcttcaggaacaacaactgggacaggtgatgaagcagctgtatcagcatctctaggc
ttaacgttcaacctttcttttggaggctggggaactttggtcaatccgactgggattgca
atgtgtcggaggtctgggtgcatagtagtggcacatgatggcaagaaaaggattaagctg
tttggcttgaatgggagctgtatacaacagtttggagaaagaggagatgcaggcaatgat
attaaatactcacttgatgtgacagtcacattggatggccacgtggttgtcacagacagc
ggagatcgctctgtcaaggtgtttgattttaatggaagaggcaagttagttatcagggaa
tccttttgtttaccatggggtttggataccacccctgaaaatgaaattatcctgtctgat
ccagaggcaggtgctctttatcgcttgacagccaattttaaaaaaggagaactgaagaag
gctcagaagatccaatctaacttatgcaacccaagagaggtggcagtttctcagacttct
ggtattattgctataatagagcacctgatagctaaaggaccaaatgacagcagcacaaaa
gtgaagatattcagtgctgacatgaaactcattggccagatggatacctttggtctaaac
ctagtgtttccctccaaagtatgtgctactgctgtggcttttgatggagagggacacata
atagtagcagatgcctataaccaagctgtattgtgcttaggaaaacctgaggaatttcct
gtcttaaggcctaaagttacccaagggctttcttatcctgtggcattgacttacacagca
aacaattctctgattgtcttagacagtggtgatcattcaattaaagtgtatactgctagt
tga
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integrated database retrieval system
