Pelodiscus sinensis (Chinese soft-shelled turtle): 102444002
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Entry
102444002 CDS
T02980
Symbol
SMARCA5
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102444002 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pss03021
]
102444002 (SMARCA5)
03036 Chromosome and associated proteins [BR:
pss03036
]
102444002 (SMARCA5)
Transcription machinery [BR:
pss03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
102444002 (SMARCA5)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
102444002 (SMARCA5)
RSF complex
102444002 (SMARCA5)
WICH complex
102444002 (SMARCA5)
B-WICH complex
102444002 (SMARCA5)
NORC complex
102444002 (SMARCA5)
BRF complex
102444002 (SMARCA5)
NuRF complex (fruit fly)
102444002 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
102444002
NCBI-ProteinID:
XP_025044797
Ensembl:
ENSPSIG00000004177
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MNDVPQTATRKRTQRNIDGCSLTDRQLKQSETGFLKEGFDDASPGKQKEIQEPDPTYEEK
MQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSVGDYRH
RRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGIL
ADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLKAVCLIGD
KDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI
VREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVER
LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDK
MRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVL
IFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSKFVFMLSTRAGG
LGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEM
KLRLDSIVIQQGRLVDXNLNKIGKSXQMIRHGATHVFASKESEITDEDIDGILERGAKKT
AEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKMAFTEWIEPPKRERKANYAVD
AYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPD
LPNAAQAQKEEQLKIDEADPLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRDDI
ENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKL
GXYKTINCNGTHFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRN
SPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSSAQKRKMD
GTPDGRGRKKKLKL
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatgtaccacagactgctacgagaaaaagaacacaaagaaacattgacggctgc
tctctgactgatagacaattaaaacaatctgaaactggatttttgaaggaaggttttgat
gatgcatcaccaggaaaacaaaaggaaatccaggaaccggatcctacatatgaagagaaa
atgcaaacagacagagcaaacagatttgagtatctgttaaagcagactgagctgtttgct
cacttcattcagcctgctgctcaaaagactccaacttcacctttgaaaatgaaaccagga
cgtccacgaataaaaaaggatgagaaacagaatctgttgtcagttggcgactatcgacat
cgtagaacagaacaggaggaagacgaggagctattgacagagagctccaaggcgactaat
gtatgcactcgatttgaagattcaccatcatatgtaaaatggggcaaactgcgtgattat
caggtccgagggttgaactggctcatctctttgtatgagaatggcatcaatggtatccta
gcagatgaaatgggtcttggaaagacactgcaaacaatttctcttcttgggtacatgaaa
cactacagaaatattcctggccctcacatggtattagttcccaagtccactttacacaac
tggatgagtgaattcaagagatgggtaccaactcttaaagcagtttgtttgataggtgac
aaagaccaaagagctgcttttgtccgagatgtattgcttccaggagaatgggatgtctgt
gtaacatcatatgaaatgcttattaaagagaaatctgtgttcaaaaaatttaactggaga
tatctagttatagatgaagcccacaggatcaaaaatgaaaaatcgaagttgtcagaaatt
gtgagggagttcaaaactacaaatcggctgctgttaactggaactccacttcagaacaat
ttgcatgaactctgggcacttctcaacttccttttgccagatgtgtttaactcagctgat
gacttcgattcatggtttgatacaaataactgtcttggggatcaaaagctggtagaacgt
ctccacatggtgctcaggccattcctcctacggcgtattaaagctgatgtagagaagagt
ttgcctccaaagaaagaagttaaaatttatgtgggtctaagcaaaatgcaaagagaatgg
tatacacgaatcttaatgaaggatatagatatattgaactctgctgggaagctggacaaa
atgagactattgaacatcctgatgcaactacgaaaatgttgcaatcatccttacctcttt
gatggagcagaaccaggtccaccttacacaacagatatgcatttggttaccaacagtggc
aaaatggttgtattggacaaattgctaccaaagttgaaagaacaaggctcacgagtacta
atctttagtcagatgaccagagtactagacatcttagaagactactgcatgtggcgaaat
tatgaatattgtagattggatggacaaacacctcatgatgagagacaagcttctattaat
gcatataacgaaccgggcagctccaagtttgtgtttatgttgagcacacgggctggtggt
cttggaatcaatctggctactgctgatgtcgtaattctttatgattcagactggaatcca
caagtagatctgcaagctatggatcgagcacacagaattggccagacaaagactgttaga
gtgttcagatttatcacggacaacacagtggaggaaagaatagtggaaagagcagaaatg
aaacttcgtttggattccatagtcattcaacaaggaagactggtagattaaaatctgaat
aaaatagggaaatctngacagatgattcgacatggagctacgcatgtgtttgcttccaag
gagagtgagattactgatgaagatattgatggtattttggaaagaggtgcaaagaagact
gcagaaatgaatgagaaactctcaaagatgggtgaaagttcactcagaaattttacaatg
gatacagagtccagtgtatacaactttgaaggggaagattatagagagaaacaaaagatg
gcattcacagagtggattgaaccacccaaacgagaacgaaaagccaactatgctgttgat
gcttacttcagggaagctcttcgtgtcagtgaaccaaaagcaccgaaagctccgcgacct
ccgaaacagcctaatgttcaagatttccagttttttcctccacgtttgtttgaactatta
gaaaaagagattctgtattacagaaaaactattgggtacaaggtacctcgtaatccagac
ttgccaaatgcagcccaagcacaaaaggaagaacagcttaaaattgatgaagctgatccc
cttaacgatgaagaattagaagaaaaggagaaattactaacacagggatttaccaactgg
aataaaagagattttaaccaattcatcaaagctaatgaaaaatggggccgtgatgatatt
gaaaatatagctcgtgaagttgaaggaaaaactccagaggaagtaattgagtattcagct
gtattctgggaaagatgcaatgagctccaggacatagaaaagatcatggctcagattgaa
agaggagaagctagaattcagaggcggattagtataaaaaaagcacttgacacaaagttg
ggataatataaaactattaactgcaatggtacccatttccaccagttgaggatatcgtat
ggaactaacaaagggaagaattatacagaagaggaggatcgctttctcatctgtatgctt
cacaagctaggatttgataaagaaaatgtatatgatgaattaaggcagtgtattcgaaat
tctcctcagttcagatttgactggttccttaagtccagaactgcaatggagctacagcga
agatgcaataccttaatcactttgattgaaagagaaaacatggaattggaagaaaaggag
aaggcagagaagaagaaacgtggaccaaagccttcttcagcacagaagcgtaaaatggat
ggtacccctgatggtcgaggaaggaaaaagaagttaaagctgtga
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integrated database retrieval system
