Pelodiscus sinensis (Chinese soft-shelled turtle): 102444041
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Entry
102444041 CDS
T02980
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X2
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102444041 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pss03000
]
102444041 (ARID1A)
03021 Transcription machinery [BR:
pss03021
]
102444041 (ARID1A)
03036 Chromosome and associated proteins [BR:
pss03036
]
102444041 (ARID1A)
Transcription factors [BR:
pss03000
]
Eukaryotic type
Helix-turn-helix
ARID
102444041 (ARID1A)
Transcription machinery [BR:
pss03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102444041 (ARID1A)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102444041 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
102444041
NCBI-ProteinID:
XP_006139209
Ensembl:
ENSPSIG00000017317
UniProt:
K7GH06
LinkDB
All DBs
Position
Unknown
AA seq
1891 aa
AA seq
DB search
MDQMGKMRPQPYGGSNPYTQQQGPQTGPQQGHGYPGQPYGPQTPQRYPMGMQGRTQSAMG
SISYAQQIPPYGQQGPSAYGQQSQTPYYNQQSPHPQQQQSPYSQQAPSQTSHSQPSYQQQ
QTQSQPPQLPSSQPPYSQQQSQTPHQQSPSPYPQQPPAAQPHQQSQPPYSQQQSQSPYQQ
QQQTPQTASSALSQQSSSYPQSQPQQQPPSAYSQQRFPPPQELSQDSFGSQASSAPSMAS
SKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPF
SPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSVQSDSILHPSM
NQSSIVQDRGYMQRTPQMPQYSSPQPGSALSPRQSSGGQMHAGMGPYQQNSMGSYGPQGA
QYGPQGGYPRQPNYNAMPNANYPSPGMGGSINPMGAGSQMHGQTGVPPYTGLPPGRMSHA
AMGNRPYGPNMANMPPQVGTGMCPPPGGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMNQ
GGMMGTGPPYGQGINSMAGMINPQGPPYSMSGNMANNSAGMAASPEMMGLGDVKLTPATK
MNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKIWVDRYLAFTEEKAMGMTN
LPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCL
YAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDL
KPPTPASTPHSQMPPLPGVRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMM
GRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNTGMGDPYNRAAGPGMGNMALGQRQHYPY
GGPYDRVRTEPGMGPEGSLGTGTPQANIMPSTPDSGMYSPSRCLQQQQQQQQRHDSYGNQ
FSTQGTSSGTPFPSQQTSIYQQQQQNYKRPMDGTYGPPAKRHEGEMYNVPYSTGQGQAQQ
QLPPAQSQQPSQQQSAQPSPQQELYNQYGSTYPATDRRPAAGPQNQFPFQFGRDRVSAPP
GSTTQQNIPPQMMGGPMQPTPEGLQQGSLWQGRNEIGYSYPNRQSSGSAAQGPAYHGVNR
TDDILHSEQRVNHEGPWPSHGNRQPPYGPSAPVPPLTRPPQPNYQTPPSMQNHIPQVSSP
APLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHIASAAVQPPMIRRDITFPPGSVEA
TQPVLKPRRRLTTKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQ
LPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQKTLLDPERFCKSSSPHPEEGEEEEAPQ
SPNYEEEEEEAAFASKDKAPVESSEEKLVSKFDKLPVKIVQKNDPFVVDYSDKLGRVQEF
ESGLLHWRIGGGDTTEHIQTHFESKMELLLTHKRASCNSVLRKCSAAESNPGTREGENLP
SDGPPEKRITATMDDMLSARPGSLAAAEEEEEVKNSAAAKESSKFPFGSSPAQSHRNIKI
LEDEPHSKDETPLCTILDWQDSLAKRCVCVSNIIRSLSFVPGNDFEMSKHPGLLLILGKL
ILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLS
PYPESICLPVLDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNVDL
ILATPPFSRLEKVYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGN
LLGFLEDSLAATQFQQSQASLMHMQNPPFESTSVDMMRRAARALLALAKVDENHSEFTLY
ESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaatggggaagatgagacctcagccatatggaggaagtaacccatacacacag
cagcagggacctcagacggggccacagcaaggccatggatatccaggacaaccatatggg
ccacagactccccagagatatcccatgggaatgcaaggcaggacacagagtgcaatgggc
agcatctcgtatgcacagcagattcctccttatggacagcagggcccaagtgcatacgga
cagcagagccagactccatattacaaccagcaaagtcctcatccccaacaacagcagtcg
ccatactcgcagcaagcaccatcccagacctctcactcccaaccttcttatcaacaacag
cagactcagtctcaacctccgcagcttccatcgtcccagcctccatactcacagcagcag
tcccagacgccccatcagcagtccccatctccatatccccagcagccgccagcagcccag
ccacaccaacagagccagcctccgtactcccagcagcagtcgcagtcaccctaccagcag
cagcaacaaactccgcaaacagcctcctctgctctttctcagcagtcttcttcataccct
cagtcacagccgcagcaacagccaccatctgcatactcccagcaacgctttccacctcca
caggagttatctcaagactcgtttgggtcccaagcatcatctgccccctcaatggcttcc
agtaaaggacaagaagatatgaacttgaatcttcagtcaaggccctccagcctgccggat
ctgtctggttcaatagatgatctaccaatgggtaccgaaggagccctgagtcctggagta
agcacatcagggatttcaagcagtcaaggagagcagagtaacccagctcagtctcctttc
tctccgcatacctcgcctcacctcccaggaatcagaggaccttccccttcccctgttggc
tctcctgctagtgttgctcagtcacgttccggtccactctcacctgctgctgtaccaggc
aatcagatgccaccccgaccaccaagtgtccagtcggacagtatcctgcatccttccatg
aatcaatcaagcatagtccaagatcgaggttacatgcagaggactcctcagatgccccag
tatagctcccctcagcctggctctgccttatctcctcgtcagtcgtctggaggacagatg
catgctgggatgggaccttatcagcagaattcaatgggaagctatggaccccagggggct
cagtatggtcctcaaggaggttatcccaggcagccaaactacaatgctatgcctaatgcc
aactaccccagcccaggaatgggaggaagtataaacccaatgggagcagggagccaaatg
catggtcagactggtgtgccaccctatactgggcttcccccaggaaggatgagccatgct
gccatggggaacaggccctatggacccaacatggcaaatatgcctccccaggtggggaca
gggatgtgccccccaccaggtggcatgaaccggaaagcacaagaagcagctgctgctgca
atgcatgctgctgccaactctatccagaacaggcctcctggctatcccaacatgaaccaa
gggggaatgatgggaactggacctccttatggacaaggaattaacagtatggctggcatg
ataaatccccagggtcctccatattctatgagtgggaatatggccaacaactcggcaggg
atggcagcaagtccggaaatgatgggccttggggatgtcaaactgacacctgcaactaaa
atgaacaacaaggcagatgggacgccaaaaacagaatccaagtcaaagaagtccagttct
tctaccaccaccaacgaaaagattaccaaattgtatgagctgggtggtgagccggagagg
aagatttgggtagatcgttacctagccttcactgaagagaaagccatgggcatgaccaac
ctcccggctgtgggcaggaaacctctagacctttaccggctctatatctctgtaaaagag
attggaggactgactcaggtcaataaaaacaagaaatggcgtgagttagccaccaatctt
aatgtgggcacgtctagcagtgcagctagttctttgaagaagcagtacatccaatgcctc
tatgcctttgagtgcaagattgaacgaggcgaagacccacccccagacatctttgcagct
gctgattcaaagaagtcccagcccaagatacagcccccatctccagcgggttcaggctcc
atgcagggtcctcaaacacctcagtccaccagcagctctatggcagagggaggagatttg
aaaccaccaacgccagcatctacaccacacagccagatgccccctttgccaggcgtcagg
agcaactctgtggggctccaggatgcctttgcagatggcagtgacccaacgttccagaag
cggaactccatgactccaaatccagggtaccagcccagcatgaatacctctgacatgatg
ggtcgcatgtcctatgagccaaacaaggatccctatagcagtatgaggaaagctccagga
agtgatcctttcatgtcctcagggcagggccccaacactggtatgggtgacccttacaat
cgtgctgcaggtccagggatgggtaacatggccctgggacaacggcaacattacccttat
ggaggtccttacgacagagtgaggacggagccaggaatgggacccgagggcagtttagga
accggaactccccaggccaacattatgccttccacccctgactcagggatgtactccccc
agccgctgtctgcagcagcagcagcagcagcagcaacgacatgattcctatggcaatcag
ttctccactcaaggcacatcctctggcaccccctttcccagtcagcaaacctctatctac
caacagcaacagcagaattacaagcgcccaatggacggcacttacggcccacctgccaag
cgacacgaaggggagatgtacaacgtaccctacagcaccggacagggacaggcacagcag
cagctgcctccagcacagagccaacagccgagccagcagcaaagtgcccagccttccccc
cagcaggagctgtataaccagtatgggagtacataccctgccactgaccgccggcctgct
gcagggccgcagaaccagttcccattccagtttggcagagacagggtctcggctccccca
ggctccaccacgcagcagaatataccacctcagatgatgggtggtcccatgcagcctact
ccagagggcctgcagcagggcagcctatggcaggggcgtaatgaaatagggtacagctat
ccaaacaggcagagttccggctctgcggcgcaggggcctgcttatcacggagtgaatcga
acagatgacattctccattcagagcagagggtcaatcatgagggaccatggccctcccat
gggaaccgccagcctccttatggtccttctgccccggtacccccactgacaagaccccca
cagccgaactaccagacccctcctagcatgcagaatcacattcctcaggtatccagccca
gcacctctgcccagacctctggagaaccgcacctcgcccagcaaatctcccttcctgcac
tcggggatgaaaatgcagaaggcagggcctcctgtccctgcctcacacatagcctcagca
gccgtacagccgcccatgatacgacgggacatcaccttcccacctggctcagtggaagct
acgcagcctgtgctgaagccaaggagacggctgacaacaaaagatattggaactcctgaa
gcctggagagtgatgatgtctctgaagtcggggctgctggctgaaagtacgtgggcctta
gataccataaacatcctgctctatgatgacaacagcataatgaccttcaacctcagccag
cttccagggttgctggaactactggtggaatacttccggcgttgcctgatagaaatcttt
gggatcttaaaagaatatgaagtgggagatccaggacagaaaacactattggatcctgaa
aggttctgcaagtcttcaagtccccatcctgaagagggggaggaagaggaggcaccacag
agccctaactacgaggaggaggaagaggaggctgcatttgcaagtaaagacaaagcaccc
gtagagagcagtgaggaaaaactagtcagtaaatttgataagcttccagtcaagatagtg
cagaaaaatgacccatttgtggtagactactcagacaagctggggcgagtacaggagttt
gaaagtggactgctacactggcggattggtggtggagataccactgaacacattcaaacc
cactttgagagcaaaatggagttactattaactcacaaacgagcttcctgcaattctgtc
ttgagaaaatgttcagcagcagagagcaatccaggaactagagagggggagaatctgcca
tctgatggtcccccggagaaaaggataacagctacaatggatgacatgctttcggcgcgg
ccaggctcactggcggcggcggaggaggaggaggaggtcaaaaactcggcagcagcaaag
gaaagcagcaaatttccatttggcagcagtccagctcagagccacagaaatataaaaatt
ctggaggatgaacctcacagtaaggacgagacacccctctgcaccatcctagactggcag
gactctctagctaaacgttgcgtctgtgtgtctaacatcatcaggagtttatcatttgtg
ccgggcaatgactttgaaatgtctaagcaccccggtctgctgctgattctagggaaactg
attctcctgcaccacaagcatccggaacgcaaacaggcaccactgacatatgagaaggaa
gaggaacaggaccaaggggtgagctgcaacaaggtggagtggtggtgggactgtttggag
atgctgcgtgaaaacacgctggttacactggccaacatttccggtcagctggacctctcc
ccttaccctgaaagcatctgtttgcctgtcctggatgggctcctccactgggctgtatgt
ccatcagcagaggcccaggacccttttccaaccctgggacctaacgctgtcctctcccct
cagagactggttttggaaactctcagcaaactcagcatccaggacaacaatgtggatttg
attcttgcaactcctccctttagtcgcttggagaaggtctatagcaccatggtgcgtttc
cttagtgaccgaaagaaccccgtgtgtcgggagatggctgtggtactgctggccaacttg
gcgcagggtgacagcctggcagccagggcaattgctgtgcagaagggcagcattggcaac
ttgttgggctttttggaggacagcctggcagccactcagttccagcagagtcaggccagc
ttgatgcacatgcaaaaccctccctttgagtcaacgagtgtggacatgatgcgtcgggca
gctcgggcgctgcttgccctggccaaagtggacgagaaccactctgagttcacgttatat
gagtcgcggctgttggacatctccgtgtcgcctttgatgaactcgttggtttcacaagtt
atttgtgatgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
