Pelodiscus sinensis (Chinese soft-shelled turtle): 102444080
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Entry
102444080 CDS
T02980
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pss03009
]
102444080 (DDX54)
Enzymes [BR:
pss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102444080 (DDX54)
Ribosome biogenesis [BR:
pss03009
]
Eukaryotic type
Pre-60S particles
Helicases
102444080 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
IpaB_EvcA
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
102444080
NCBI-ProteinID:
XP_025044447
LinkDB
All DBs
Position
Unknown
AA seq
840 aa
AA seq
DB search
MAPPLPAGRFSPRFDQPPELAVLVFVPSPDGRTLGRLTSYRSLPNPAKGENQTNNLCFSL
PVPGKPVHLTTATRPLLSAPCDPQQACAQPLPAFPAPECPSDVEPDTREMVRVQNRKKKK
SGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKAIPVILDGKDVVAMARTGSGKTACFLIPM
FEKLKVHSAQTGARALVLSPTRELALQTMKFTKELSRFTGLKTALILGGDRMEDQFAALH
ENPDIVIGTPGRLMHVMVEMNLKLHSVEYVVFDEADRLFEMGFAEQLQEIIARLPEGRQT
LLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLSEQLKTAFFHVRPDDKPAVLLHLLRNV
VRPQDQTLVFVATKHHVEYLKELLTAQGVSCAHVYSSLDQAARKINIAKFVQGQCAVLIV
TDVAARGIDIPMLDNVINYSFPAKAKLFLHRVGRVARAGRSGTAYSLVAPDETAYVFDLH
LFLGRPLTLASPHEKPSDRDGVLGRVPQSVVDDEECLLLAERERSLDLQSLHRVSENAHK
QYLNSRPGPSPASVKRVKELDFSLLGIHPLLSECLTIFEINATSKTLASNVMRAKRSRDR
SLVTKYRREQQERRAGAALRGRDPAAPAPAEEEGDLWEAEAAIPYQPKDLESERGLSVGG
ESSAFEQQASGAMLDLLGDETHSMNKSTQLLRWDRKKKRFVSKTGQEEKKKICTESGRRI
SGSYKKNLYENWKKKYKVEERDSEEEVASEPRGGMHRRSRGGQRLPRTPEKHGPQQGKGR
SELKSKQQILKQRKRVVKQNFLQKGGLRQLKAKNRQRVQDLRRAAFGRGTAKKGKMRKRM
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggctcctccgctcccagccggacggttctcgcctcgtttcgaccaacctcccgagctc
gctgttctcgttttcgttccatccccggacgggaggacactgggacggttgacttcttat
cgctcgctacccaacccagcaaagggggaaaaccaaacaaacaacttatgtttcagtctc
cctgtaccagggaaaccagtacacctgacaaccgctacccgacctttgctctccgcacct
tgcgatccccagcaggcctgtgcccagcccttgccagccttcccggcgcccgagtgcccc
tctgacgtggagccggacaccagggagatggtgcgggtgcagaatagaaagaagaaaaag
tctggaggcttccaatctatgggcttgagttatcccgtgtttaaaggggttatgaagaaa
ggctacaaagtgccaacaccaatccagcgaaaggccatccctgtgatcctggatgggaaa
gacgtggtggccatggcaaggacaggcagtgggaaaacagcttgtttcctcatccccatg
tttgagaagctgaaggtgcacagtgcccagacaggggcacgagccctcgtcctgtcgcca
acccgtgagctcgccttgcagacgatgaaattcacaaaggagctgagcaggttcacaggc
ctgaagactgcgttgattctgggaggagacaggatggaagaccagtttgcagctctgcac
gagaaccctgatatagtcattggcacccccgggcgcctgatgcacgtgatggtggaaatg
aacctgaagctgcacagcgtggaatacgtggtgtttgatgaagctgacaggctctttgag
atggggtttgcagagcagctgcaggagatcatcgcccggctccccgagggccgccagacc
ctgcttttctctgccacgctccccaagctgcttgtggagtttgctcgggctggtctcacg
gagccagtcttgatccggttggacgtggacacaaagctcagtgaacagctcaagacggcc
ttcttccacgtgcgtccggatgacaagccggccgtgctgctgcacctgctgaggaacgta
gtgaggcctcaggaccagacgcttgtcttcgtggccaccaagcaccacgtggagtacctc
aaggagttgctgacagctcagggcgtgagctgtgcccatgtctacagctccctggaccag
gcagcccggaaaatcaacatcgccaagtttgtgcagggccagtgcgcggtgctgatcgtc
actgacgtggctgcccgcggcatcgacatccccatgctggacaatgtcatcaactatagc
tttcctgccaaggccaagctgttcctgcaccgcgtcggccgcgtggcccgcgccggccgc
agtgggacagcctactccctggtggcaccggatgagaccgcctatgtctttgacttgcac
ctgttcctggggcgcccgctcacccttgccagcccccacgagaaaccctcagacagggac
ggggtgcttggcagagtcccccagagcgtggtcgatgacgaggagtgtctgctactcgct
gagcgcgagcgctcgctggacctgcagagcctgcaccgggtgtcggaaaacgcgcacaag
cagtacctcaactcccggcctggcccctcgccggcgtccgtcaagagggtgaaggagctg
gacttctccctgctgggcatccatccacttctcagtgagtgcctgaccatctttgagatc
aacgccaccagcaagaccctggccagcaacgtgatgcgcgccaagcggagccgcgaccgc
agccttgtcaccaagtaccggagggagcagcaagagaggcgggctggggctgcgctgcga
ggccgggacccagcagctcccgcccctgcagaggaggaaggagacctctgggaagcggaa
gcggcaatcccataccagcccaaggacttggagagcgagcgggggctgagcgttggtgga
gagagcagcgccttcgagcagcaggcttctggcgccatgctcgacctgctgggggacgag
acccacagcatgaacaagagcacacagctgctccgctgggaccgcaagaagaagcggttt
gtgagcaaaactggccaagaggagaagaagaaaatctgcaccgagagtggcaggcgcatc
agtggctcttacaagaaaaacctctacgagaactggaagaagaaatacaaagtggaggag
cgggactctgaggaagaggtggcgagtgagccaagaggtgggatgcaccgcaggagcaga
ggaggccagcggctgccccgcaccccagaaaagcatggcccccagcagggaaaggggcgg
tccgagctgaagagcaagcagcagatcctgaagcagaggaagagggtggtcaagcagaac
tttctgcagaagggcggcctgaggcagctgaaagccaagaaccggcagcgggtgcaggac
ctacgcagggcagcgttcggccgtggcactgccaagaaggggaaaatgaggaagaggatg
taa
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