Pelodiscus sinensis (Chinese soft-shelled turtle): 102444257
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Entry
102444257 CDS
T02980
Symbol
YTHDC2
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pss03041
]
102444257 (YTHDC2)
Enzymes [BR:
pss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102444257 (YTHDC2)
Spliceosome [BR:
pss03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102444257 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
HA2_C
OB_NTP_bind
Helicase_C
RNA_hel_CTD
R3H
DEAD
WHD_HA2
AAA_19
AAA_22
nSTAND3
Ank_2
ATPase
PhoH
AAA_7
Ank_4
nSTAND_NTPase5
AAA_23
AAA_29
SRP54
T2SSE
AAA_16
AAA_30
ABC_tran
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
102444257
NCBI-ProteinID:
XP_025046162
Ensembl:
ENSPSIG00000014798
UniProt:
K7G944
LinkDB
All DBs
Position
Unknown
AA seq
1367 aa
AA seq
DB search
MEFPSSLTSTERAFIHRLSQSLGLISKSKGKGANRYLTIKKKDGSELARTVMACSLTPNT
KHAIRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVKRGE
SEFDSFRQSLPVFEKQEEIVRIIKENKVVLIVGETGSGKTTQIPQFLLDDCYKNGIPCRI
FCTQPRRLAAIAVAERVAAERREKIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAG
DSTLSTVTHVIVDEVHERDRFSDFLLTKLRDILQKQTTLKLILSSAALDVNLFIRYFGSC
PVIHIQGRPYEVKEMFLEDLLRSTGYSNKEMVKYKKEKLREEKQQTTLTEWYSAQDDTSK
PESQRQRTVPSVAEEYDLLDDGGDTVFSQLTEKDVNCLEPWLIKEMDSCLSDIWLHKDVD
AFAQVFHLILTENVSVDYRHSDTSATTLMVASGRGFLSQVEQLIGMGANVHSKSSNGWMA
LDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQANGGDLSAEDRELLKAYHHSFDDEK
VDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADNAHRYQVFMLHS
NMQTSDQKKVLKTPPLGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALNCVTML
KMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLL
APINCPIADFLMKAPDPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGK
MVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRA
FQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNT
NSENWAVVKGALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQ
AAAIQALPTDWLIYDEMTRAHRIANIRCCSTVTPVTVSLFCGPARLPSNALQEPSSFRVD
GVPNDSSDSEMEDRTTANLAALKLDEWLHFKLDPEAASLLLQLRQKWHSLFLRRMRAPSK
PWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSNSSRKSSA
ETEFSDDSSNAEKVLMKSTSPAFHPPQKYKERGILHSKRNSDDRSDQSSVKSTDSSSYPS
PCASPSPPSSGKGSKSPSPRPNMPVRYFIMKSSNLRNLDISQQKGIWSTTPSNERKLNRA
FWESSMVYLVFSVQGSGHFQGFARMSSEIGREKSQDWGSTGLGGVFKVEWIRKESLPFQF
AHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWDRIPLGEKNTTD
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atggaatttccttcttctttgactagtactgaaagagcatttattcaccgactcagtcag
tctcttggtctgatttcgaaaagtaaaggcaaaggagcaaatagatatttaaccattaag
aagaaagatggatcagaattggctcgtactgtaatggcatgtagtttgacacccaataca
aagcatgcaattagaagcctaattcagagatttcctgtgaccaataaagaacgcactgaa
cttctaccaaaaacagaacgaggaaatgtttttgctgttgaagctgagaacagagaaatg
agtaagacaagtgggcgacttaacaatggcatccctcagattcccgtgaaaaggggggaa
tctgaatttgattcctttaggcaatctctgccagtttttgaaaaacaggaagaaattgtc
agaattattaaagaaaataaagttgttctgattgtgggagaaactggatcaggaaaaaca
actcagattcctcagtttcttcttgatgattgctacaaaaatggaattccttgtcgcata
ttttgcactcagccaagacgtttagcagctattgctgtggctgaaagggttgctgcagaa
agaagagaaaaaattggccagactattggctatcagatccgattagaaagcagggtttcc
ccgaagacgctgctaacattttgcactaatggtgtactacttcgcacgctaatggcagga
gacagcacactatcaactgtgacgcatgttattgtggatgaagtacatgagagggatcga
ttcagtgatttcttgctaacaaagttaagagacatattgcaaaaacagacaactctgaaa
ttgattctttctagtgctgccctcgatgtgaatctatttatcagatattttggaagctgc
ccagtgatacacatacaaggaagaccatatgaagttaaggagatgtttcttgaagacctc
ttacgaagtacaggatattcaaataaagagatggtaaaatacaaaaaagaaaaactgcga
gaagagaaacagcaaacaactcttacagaatggtattccgctcaagatgacactagcaaa
ccagaatctcagagacagagaactgttccaagtgtggctgaagagtatgacttgcttgat
gatggtggtgacacagtattcagtcaactgactgaaaaagatgtgaattgcctggaacca
tggctaataaaagaaatggattcttgtctctctgatatatggttgcataaagatgtcgat
gcctttgctcaggtgtttcaccttatcttaactgaaaatgtcagtgttgattacagacac
agtgataccagtgcaactacactaatggttgcttcagggagaggtttcttaagtcaggta
gaacagctcattggaatgggagcgaatgtccacagcaaatcatctaatggctggatggct
ttagattgggctaaacactttggacagactgagattgtagatcttctggaatcttacagt
gcttcattagagtttggaaatctggatgaaagttctctagtgcaagcaaatggtggtgac
cttagtgcagaagacagagaactattgaaagcttatcatcacagttttgatgatgaaaaa
gtggatctggatctgattatgcacttactttacaacatctgtcatagttgtgatgcagga
gcagttttaatttttcttcctggatatgatgagatagttggcttgagggatcgaattctc
tttgatgacaagaggtttgctgataatgctcacagataccaagtttttatgctgcattca
aatatgcaaacatcagatcagaagaaggtgctaaaaactccaccactgggcattcgcaaa
ataattctttctactaatattgcggaaactagcatcacagtcaatgatgttgtttttgtt
attgattctggcaagatgaaagagaagtcctttgatgcgctgaactgtgttaccatgcta
aaaatggtgtggatttcaaaagcaagtgccatccagagaaaaggcagggctggacgctgt
cgacctggaatttgtttccgactcttcagcaggctgcgatttcagaatatgttggaattt
cagactccagaacttctaagaatgccactccaggaactttgtttgcacacaaaattgcta
gcaccaattaactgtccaattgctgacttcttgatgaaagccccagatcctccaccagcc
ttaattgtgagaaatgctgttcagatgcttaagacaatagatgctatggatacctgggaa
gatctcacggaacttggttatcatctggctgacttgcctgtagagccacaccttggtaaa
atggtgttgtgtgctgttgttttgaagtgcctggatcctattcttaccattgcttgtact
cttgcatatcgagatccttttgtgctacctacacaggcctcacaaaaacgtgcagccatg
ctgtgtagaaaacgttttactgcaggaacatttagtgaccatatggcacttctcagggca
ttccaggcatggcagaaggcacgaagtgatggctgggagagagccttctgtgagaagaac
tttctctctcaagctactatggaaattatcataggaatgagaacacagttgcttggtcag
ctcagagcatcaggttttgttagagccagaggtggtggtgatattcgagatgtaaacacc
aactctgaaaattgggctgtagtgaaaggtgctttagtggctgggatgtaccctaattta
gtgcatgtggatagagaaaaccttgtattgactggcccgaaggagaagaaagtgagattt
catcctacctctgttcttagccaacctcagtataaaaagattcctccagcaaacggtcaa
gctgcagcaattcaagcactccccacagactggcttatatatgatgaaatgactagagca
cacagaatagcgaacatcaggtgctgttcaactgtgacacctgtcactgtgtccctcttc
tgtggtccagctcggttgccaagtaatgctttacaggagccctcctcatttagagtggat
ggtgttcctaatgatagtagcgatagcgagatggaagacagaactactgctaatctggct
gcgttgaagctagatgaatggctacatttcaaactggatcctgaggctgccagtctgctg
ctacaactcagacagaaatggcatagtttgtttctgcgtcgtatgcgagctccttctaaa
ccttggtctcaagttgatgaagcaactataagagcaattatagctgttttaagtaccgaa
gagcagtctgcaggcttacagcaaccttcaggtattgggcaaagaccaaggcctatgtct
tctgaggaacttcccttagcctcttcttggagatcaaacagcagtaggaaaagttcagca
gaaactgaattctctgatgactcttctaatgctgaaaaagtcctaatgaaatctacgtct
ccagcatttcatccgccacagaaatacaaagaaagaggtatcttgcactctaaacgaaat
tcagatgataggtcagatcagtcatcggtgaagtccacagacagtagtagttatcctagt
ccatgtgccagtccttctcctccatcatctggaaagggatcgaagtctccttcacctaga
ccaaatatgccagttcggtacttcattatgaagagtagcaacttgagaaatcttgatatt
tctcaacaaaaaggtatctggtctacaactccaagtaatgagcgaaaactaaatagagct
ttttgggaaagcagcatggtttatttggtattttcagttcaaggatcaggacactttcag
ggttttgctagaatgtcttcagagataggacgtgaaaaaagtcaggactggggctctaca
ggcttgggaggagtgtttaaggtggagtggatccggaaagaaagtcttccctttcagttt
gcacaccacttactcaacccttggaatgataacaagaaagtacaaataagcagagatggc
caggaattggagccacaggttggtgagcagttgctacaactttgggatcgtattcctttg
ggagagaaaaacacaactgattga
DBGET
integrated database retrieval system
