Pelodiscus sinensis (Chinese soft-shelled turtle): 102444286
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Entry
102444286 CDS
T02980
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pss04121
]
102444286
Enzymes [BR:
pss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102444286
Ubiquitin system [BR:
pss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102444286
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-RING_2
PML_CC
Crescentin
ApoLp-III
BPL_C
Fuseless
Motif
Other DBs
NCBI-GeneID:
102444286
NCBI-ProteinID:
XP_006120140
Ensembl:
ENSPSIG00000001675
UniProt:
K7F0W0
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MSLQELIREDFLTCKICYDLYTVPKILPCLHSYCQHCLEPVVRDGSLQCPECRLKTGVPG
GASSLKTNFFINSLLELFQIKHNRDLACTVCSDAQKIVTATARCLDCKDFLCQSCNQGHC
CSRLTLHHRVVKLEEFLAGGYDAEMRLLQELCCQDHQQEALRFFCDTCSTPICRDCRMLD
HFQHKVVSMANAVQRERPSVEQLIQSLEGTVTCISEQEKAVEETIDKLKTSGENIKERIT
KYVDDLISYVLAQKEAVLGELSAFLTQQMEGCRLVKEELQSQREKAVSTKEFSQRVLSVG
KDYEILHLEGMIRNRIQELQTYIPRKLERQIPELTIAWDQPEMQSEAALFSLVFPGEQPE
GDTETVFEPASEVSASPSEESEVELNSPLDSEEDSCPSSEESALGTPAKDPSYCNRHRKR
PKRVCTFEVDQSCSQEKPNITGIAVLPHTGGILLLDQENDEIKQYGADGHLEQSIPLPDS
DGVFTGISLCGDILACSSDSFLFFLTLEGKFLHKLLLRGSESSYAITSYEDSYVAVSEGT
LCSISLYSPSGACVGRVEPRDYRGGKFLFIAVNAWEEFIVSDFIKKQIVIIERSGLILNV
LKTSHSLLTKPFSVCVDSASNIFVVDQLKVIKFSPDGETGEVVLSNQSRLKRPRVLAVDD
SGRLVLVQEDGYVHIYCF
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtccttacaagagttaatccgggaggatttcctgacctgcaaaatctgctatgatctc
tacacagtgccaaaaatccttccatgtctacacagttactgccagcattgtctggaacca
gtagtgagggatggatccctccagtgtcctgagtgccgactgaaaacaggtgtcccagga
ggtgcctcaagtctgaaaacaaacttcttcatcaacagcctcctggagttattccagatt
aaacacaacagggacttggcctgcacagtctgctcagatgcccagaaaattgtgactgcc
actgctcgttgcctagactgcaaagatttcttgtgccagtcctgcaaccagggccactgc
tgctcccgtctcactcttcatcacagggtggtgaagctggaggagtttcttgctggggga
tatgatgctgagatgaggctgctgcaggagctgtgctgccaggaccatcaacaagaagca
ctccgattcttctgtgacacctgcagcactcccatctgcagggactgccgcatgctagac
catttccagcacaaggtagtctccatggcaaatgctgtacagcgagagaggccttctgtc
gagcagctaattcagagcctggagggaacggttacatgcatctctgagcaggaaaaagct
gtggaagagacgatagataagttgaagacatcaggagagaacataaaagagaggatcacc
aagtatgtggatgaccttatctcctacgtcctggcccagaaagaagccgtgctgggcgag
ctgtctgctttcctgactcagcaaatggaaggctgtcgcctggtgaaagaggagctccag
agccagagagagaaggcagtcagcaccaaggagttctctcaaagggtcctttctgtggga
aaggactatgagatcttacacttggagggcatgataaggaatcggattcaggagctccag
acatatatcccacggaaactagagcgccagatccctgaattgaccatagcctgggatcag
ccggaaatgcagtctgaggcagcactcttcagtcttgtgtttcccggggaacagcctgag
ggagacacggaaactgtttttgagccagctagcgaggtatctgcctcccccagcgaggag
tctgaggttgagctaaactcacctttggattcagaggaggactcgtgtccaagctctgaa
gagagtgctcttggcacccctgccaaggacccctcttattgtaataggcacaggaaaagg
cctaagcgtgtctgcacttttgaggtagaccagagctgctcccaagaaaagcccaatatc
actggcattgcagttctgcctcacactggtggcattctcctgttggatcaggagaatgat
gagataaagcagtatggtgctgatgggcacttggaacaatcaatacctctgccagactcg
gatggagtctttactggcatttcgctctgtggagacatcctggcttgttcttcagattct
ttcctgttcttcctgacccttgagggcaagtttctgcacaaattgcttctaaggggatca
gagtcttcctatgccatcacctcctatgaggactcctatgttgctgtgagtgagggcacg
ctctgctccatctccctttacagcccttcaggagcctgcgtgggcagggtggagcccaga
gattaccgtggggggaagttccttttcattgctgtcaatgcctgggaagaattcattgtc
tcagacttcatcaagaagcagattgtcatcattgagaggtctggactgattctcaatgtg
ctgaagacctcccactcactgctaacaaagccattcagcgtatgcgtcgattccgccagt
aacatctttgtggtcgatcagttgaaagtgattaaattttcaccagatggtgagacagga
gaggtagtgttgagcaaccaaagtcggctgaagagaccccgtgtccttgctgtggatgac
agcgggcgccttgtcctggtgcaagaggatggttacgtccacatttactgcttctag
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integrated database retrieval system
