Pelodiscus sinensis (Chinese soft-shelled turtle): 102444459
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Entry
102444459 CDS
T02980
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pss03037
]
102444459 (NPHP4)
Cilium and associated proteins [BR:
pss03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
102444459 (NPHP4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPHP4_C2_3rd
NPHP4_C2_2nd
Ig_NPHP4_1st
Ig_NPHP4_4th
Ig_NPHP4_2nd
Ig_NPH4_3rd
NPHP4_SK
Motif
Other DBs
NCBI-GeneID:
102444459
NCBI-ProteinID:
XP_075762561
Ensembl:
ENSPSIG00000004272
LinkDB
All DBs
Position
23:complement(23471342..23599532)
Genome browser
AA seq
1455 aa
AA seq
DB search
MPKGRGDLLSSKMSEWQRIFVQNLAVPPHCQRRRHPPRESIAFQCVLKYVEGNVMKQRVL
EGLSEVEFQLRLTLFDITYRLFFGRTWKSSTRPLKAGPGQPPKVVFNETLYFHTSLNHPS
IVAVVEVVAAAKTREGTHQDLTCGFGILHLFNSKSEPTDMATTDRGLKLYHGTPRALLHP
LLQDPIEQNKYMTVVENTHLQYTLRRHPPLEATYHLFPENTLVSGLEKIPGLLPTHRETN
DFFRKPHLMKSVTWHVDKLSIHLYPSLEKFEEELLDSLNCDRLLKDSSVVDGSGVVIQER
RLHVGVHNGFCFVQAPQVVVVVPQAEVARGRSASVHRKRGPSAKPSVVGQALVLRSRIRL
TEMVRHPAFAIVFQLEYVFWAPSGVERKVLSMSSLAKAAYMHSIRWAVWNPSLDSSSTEV
ILPLQGGAQHNPSHVLVYKMPPTSMSSEEVKQVESGTVQFQFSTDSEEHLGTSTNAFSHI
GQESLHSVKPRIPSRSAPSSPQMLVSTQDYPQGPGLSLSQLSASPRSPPVSPSSNPPFQR
QTGSPVPRSPGTSQRRRAQEPYGSSGGGIAHLEAELGHGALVLDSSASDQLQELPFAPVH
APIVAMGTQSRSSSSVLTRASLSRLHAAGFPEILDCNKEPAEVVDPTDSVNFNPQREEAD
FLQSNEIILQFLAFSRIPQDGMGTAWPRTMYFTFQFYRFPPVTTPRLQLVKMDHSGTASS
AASSYVLVQIEKDGTLKSGSAGFQLKYMVDPAFLKPGEQRWFVRYIADHNLQIDVWDGDS
LLLVGSAAMKLKPLLRQGRTAVQALHELEVMTTEYEQDATVTSGDVLRHGSVKPIGVYAV
VKGRLHLNLANVGHLCEQRLKKSNSLPPSHSRIVSSHDGTSGFHGGSLFSFHTPGAKNVC
QAQKLADVDGELAAMLASRLQEVSTAFQHTSREASALRRRKVARMMMVRQLEAREEDAGG
RKASLMGQREERMQHSRDLQIIDAYRERLKAEGISSMLSQAITTNYTLYATLGTAEFFEF
ALKNPYNVQHTVTIEIDHPELSVIVDSREWRHFRELTQTISTPVEEDMFHLQDNQMPQIY
LRPKETIHIPFKYQTFSGDHAVMMQPGPAELRFNKGKETAPPWKSSAVLTKRIKVSFKAN
GHKPIAILSVSVESQPPVVDQTFRFYHPELTFLKKSIRLPPWYTLPGAPAGMPGGEPEMY
VRCSDPNIICETKKMGPGEPQDVFLKVAGGPSPQIKKFFVAIYTDAWLAAPIQIWQVYLH
SLQRVDVSCITGQLTRLSLVLRGTHTIRKVRAYTSHPQELKVDPEEVFILPPNGMQDLHV
GVRPQKAGSRFIYLNLVDVEYHQLVSSWLVCVSCRQPIISKAFEITLPAGGGKGSNKRIT
YTNPYPSRRVYFLHTNRADLLQFKEDSFELGGGEMYTIGLRFAPSQSTGEEEILIYINDQ
EDKNEETFCVKVAYQ
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaggaagaggtgaccttctaagcagcaagatgagtgaatggcaaaggattttt
gtgcaaaacctggctgttcctccgcactgccaaaggaggcgacaccccccgagggaatca
atagcatttcagtgtgtcctgaagtatgttgagggaaatgtaatgaagcagcgtgtgctt
gaaggcttgtcggaggttgagttccagctccgcctgaccctctttgacatcacgtaccgt
cttttctttgggagaacatggaagagcagcacaaggccgctcaaagctgggccaggacag
ccacccaaagtggtgttcaatgagactctttacttccacacatctttaaaccaccccagc
atcgttgccgtggtggaagtggtggcggcagccaagacgcgagaggggacgcaccaggat
ctgacgtgcgggtttggaattctgcacctgttcaacagcaagtcagagccaacagacatg
gccacgacagacagagggctcaagctgtatcatgggacgccgcgagcgctcctgcacccg
ctcctgcaggacccgatcgaacagaataaatacatgacggtggtagagaacactcacctc
cagtacaccctgcggcggcacccgcccctcgaggccacgtaccacctcttccctgaaaac
acgctggtgtctgggctggagaagatccctggcttgctaccaacacatagggaaacaaat
gatttctttcgaaaaccccacctcatgaagtcggtcacatggcacgtggataagctgtcc
atccatttgtacccttcattagaaaagtttgaggaagagctgctggattcactcaattgt
gatcgtttactgaaggacagctcggtggtggatgggagcggagtcgttatccaggaacgc
cggttgcacgtcggggtccacaacggcttctgcttcgtccaggcgccgcaggtggtggtg
gtggtgccgcaggccgaggtggcccgggggcgctcagccagcgtccacaggaaacgaggg
cccagcgccaaaccaagtgtggttggtcaagctttggttctgagaagccgcattcgtctg
actgagatggtccgtcacccagcattcgcaatcgtcttccagctggagtacgtgttctgg
gcgccaagcggagtcgagaggaaggtgttgtccatgtcctctttggctaaagcagcctat
atgcattccatccgatgggctgtttggaatccttcgctggactcgagttctacagaagtg
atcttaccactgcaaggaggtgcccagcataaccccagccatgtgctggtttacaagatg
cctcctaccagcatgagctctgaagaggtgaagcaggttgagtctggcacagtccagttc
cagttttccactgattcagaggaacatcttggaacttctacaaatgcgttcagtcacatc
ggacaagaatcgcttcactcagtcaagccacgcataccctctcgcagtgcaccgtcttca
cctcagatgttggtttctactcaagactatcctcaagggcctgggctgtcgctatcccag
ctgtctgcatcaccacgttctcctcctgtcagcccctcatccaaccccccgtttcaacgg
caaactggctctccggtgccccggtcccctgggacgagccagcgcagacgtgcacaggag
ccgtacggaagcagtggcggcggcatagctcacctggaggctgagctcggccacggcgcc
ttggtcctggattcctcggcaagtgaccagctgcaggagctgccttttgctcccgtgcac
gctcctatcgttgccatgggaacccagagtaggagttctagctcggtcctcactcgggcc
tctctctctcgcttgcatgccgctggctttccggaaatcctggattgtaacaaggagcca
gcagaagttgtggaccccacagactccgtgaacttcaaccctcaaagggaagaagctgac
ttcttgcaaagcaacgaaatcattttgcagttccttgccttcagcaggatcccacaggat
ggcatggggacagcatggccaaggaccatgtatttcaccttccagttttaccgtttccca
cccgtcacaacaccacgattgcagctggtcaagatggaccactctgggacagccagttcg
gctgcctcttcctatgtcttagtccagatcgagaaagatggaacccttaagagcggatct
gcagggtttcagctaaagtatatggtggaccctgcctttctgaagccaggagaacaacgc
tggtttgtacgttatatagctgaccacaacctccagatcgatgtttgggacggagattca
ttgctcctcgttggatctgctgccatgaagctgaagcctttgctgcgccagggccggaca
gcggttcaggccctgcatgagctggaagtgatgacaactgagtacgagcaggacgcaacc
gtgacgagtggcgacgttctcagacatggctccgtgaagcccattggtgtctacgcagtc
gtgaaaggccgactccacctgaacttggccaatgttggtcacctgtgtgagcagaggctg
aagaagtcaaactccttgcccccctcccactctcgcattgtctcctcgcatgacgggacc
agcggcttccatggaggcagcttgttctccttccacacccctggggctaagaacgtgtgc
caagcccagaagctggcggacgtggacggcgagctggcggccatgttggccagccgcctg
caggaggtgagcacggccttccagcacaccagccgcgaggccagtgccctccgcaggcgg
aaggtggcgaggatgatgatggtgcggcagctggaagcccgggaagaggatgccggcggg
aggaaagcaagcctcatgggccagcgtgaggagcgcatgcagcactccagggacctgcag
atcatcgatgcttaccgggagcgccttaaggccgaaggcatctccagcatgctgagtcag
gccatcaccaccaactacacgctctacgccacgctgggcaccgccgagttctttgagttt
gccctgaaaaacccctacaatgtccagcacacggtgaccatcgagattgaccatcctgag
ctgagtgtgattgtggacagcagggagtggagacacttcagagagctgacccaaaccatt
agcacgccagtcgaagaggacatgtttcaccttcaggacaaccagatgcctcagatctac
ctgcgccccaaagagaccattcacattccatttaaataccagaccttctctggagaccac
gctgtcatgatgcagcccggccctgctgagctgagattcaataaaggcaaggaaactgca
ccaccctggaaatccagtgccgtgctgacaaaacgcatcaaggtctcctttaaggcaaat
ggccacaaacccattgcgattctcagtgtcagtgtggagtctcagccccccgtggtggat
cagacgttccgattctatcacccggagctcaccttcctgaagaaatccatacggttacct
ccgtggtacactctgccaggtgcccctgcgggaatgccaggtggggaacccgagatgtac
gtccgctgcagtgaccccaacatcatttgcgaaaccaaaaaaatggggcctggggagcca
caggacgtgtttttaaaagtagctggaggaccaagcccacagatcaaaaaattctttgtt
gctatttacacggatgcctggcttgctgctcccatccagatctggcaggtttaccttcac
tcgctgcaacgtgtggacgtgagctgcataactggccagctgactcgcctttccctggtt
ctcaggggcacccacaccatcagaaaagtgagagcttatacctcacatccgcaggagctg
aaggtggatcccgaagaggtgtttattctccctccgaatggcatgcaggacctgcatgtt
ggcgtgaggccacagaaagctggcagcaggtttatctacctcaatctggtggatgtggaa
taccaccagcttgtttcgtcctggctggtgtgtgtctcctgccgacagcccatcatttct
aaggcgtttgaaataacactccctgccggcggagggaaaggctccaacaagcggatcacg
tacacgaacccgtatccctcccggagggtgtacttcctgcataccaaccgagcggacctg
ctgcagttcaaggaggattcctttgagcttggaggaggggagatgtacaccattggcttg
cggttcgcacccagccagagcaccggcgaggaggaaattctgatttatatcaacgatcag
gaagataagaatgaagaaaccttctgtgtgaaggttgcctatcaataa
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