Pelodiscus sinensis (Chinese soft-shelled turtle): 102444483
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Entry
102444483 CDS
T02980
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102444483 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pss03041
]
102444483 (PRPF6)
Spliceosome [BR:
pss03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102444483 (PRPF6)
Complex C
U5 SnRNP specific factors
102444483 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
PRP1_N
TPR_19
HAT_PRP39_N
TPR_16
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_17
TPR_2
ARM_TT21_2nd
FAT
TPR_CcmH_CycH
T7SS_EccA1_N
ARM_TT21_C
TPR_21
Motif
Other DBs
NCBI-GeneID:
102444483
NCBI-ProteinID:
XP_006132536
Ensembl:
ENSPSIG00000007717
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
CLLVSQCSATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKNQAADDDDEDLNDT
NYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERP
KIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQTGEN
HTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTLMDMRLS
QVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIASA
RLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIY
IRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVEL
WLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRA
NGVEINREQWIQDAEECDKAGSVATCQAIMRAVIGIGIEEEDRKHTWMEDADSCVAHNAL
ECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAK
SKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTAR
VFMKSVKLEWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQIEEQDELIEKAREAYNQGL
KKCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPDLWLESVRLEYRAGLKNIA
NTLMAKALQECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK
ITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVKKRCENAEPRHGELWCEVS
KDIENWQKKIGEILVLVAAKIKNAF
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
tgtctactggtctctcaatgtagtgctacaggttttaccacccgttctgatattggtcca
gctcgagatgccaacgatccagtggatgatcgtcatgctccgccagggaagagaacagtt
ggggatcagatgaagaaaaaccaggcagctgatgatgatgatgaagatctgaatgacacc
aattatgatgagtttaatggctatgctgggagcttgttctcaagtggtccttatgaaaaa
gatgatgaagaagctgatgctatatatgcagctttggataagagaatggatgagcggaga
aaagagagaagagaacaacgggagaaagaggagattgaaaagtaccgaatggaacgtccc
aaaattcagcagcaattttcagatttaaaaaggaagctagcggaagtcacagaggaagag
tggctgagtattccagaagttggtgatgccaggaacaaacgtcagaggaatccacgttat
gaaaaactgactcctgttcctgatagtttctttgctaaacacttgcagactggggagaat
catacatctgtggatccccgacaaacgcaatttggtggtctgaacactccatatccagga
ggtttgaacactccttatccaggaggaatgacacctgggctaatgacacctgggacaggt
gaactagatatgaggaagattgggcaagccaggaataccttgatggatatgagactgagc
caggtgtccgattctgtgagtggccaaactgtggtggacccaaagggatatctgacggac
ttgaattctatgatacctacacatggaggagatatcaatgacatcaagaaagctcgttta
cttttgaaatctgtacgggagaccaatcctcatcatccaccagcttggatagcttcagcc
cgactggaagaggtcacaggcaaactgcaagtagctcgaaacctcatcatgaagggaaca
gaaatgtgccccaagagtgaagatgtttggttagaagctgcccgtctgcagcctggggat
acggcaaaggctgtggtggcccaggcagtccgccacctcccacagtctgtccggatttat
atcagagcagcagaactggagactgatatacgagcaaagaaacgtgtccttaggaaagcc
cttgagcatgttccaaattcagtacgcttgtggaaggcagcagtggagttagaagaaccc
gaagatgctaggataatgctgagccgagcagtggaatgctgcccaaccagcgtggaactg
tggcttgctctggcaaggctggagacatacgagaatgctcgtaaagtcttaaataaagcc
cgtgagaacatcccaacagaccgtcacatttggataactgctgccaaactggaggaagcc
aatggaaacactcagatggtggagaaaatcattgacagagctatcacgtctctcagagca
aatggagtagaaatcaacagagagcagtggatccaggatgctgaggagtgtgataaagct
gggagtgtagccacatgtcaggctattatgcgagctgtgattggaattgggatcgaagaa
gaagatcggaaacatacttggatggaagatgcagatagctgtgttgctcacaatgcctta
gagtgtgctcgggcaatttatgcttatgctttacaagttttcccaagcaaaaaaagtgtg
tggttgcgagcagcctacttcgaaaagaaccatggaaccagggagtcgctggaagctctc
ttgcagagagctgtggctcactgtcctaaagcagaagtgttgtggctcatgggagccaaa
tcaaagtggctggctggagatgtgcctgcagccagaagcattttggccctggctttccag
gccaaccccaacagtgaagagatctggctggctgcagtgaagctggagtctgaaaacaat
gaatatgaaagagcgaggaggttactggcgaaagcgcgtagcagtgcccccacagccaga
gtctttatgaaatcggtgaaattggaatgggtgctcgggaacattgctgctgcccaggag
ctctgtgaggaagccctgaagcactatgaagacttccccaagctgtggatgatgaaaggg
cagatagaggagcaagacgagctaatagaaaaggctcgggaagcctataatcaggggctg
aagaagtgcccccattccacacctctctggctcttgctgtccaggctggaggaaaaagtc
gggcagctgaccagagcaagagccatcttggagaagtctcgtttgaagaatccgaagaat
ccagacctgtggttagagtctgtgcgattagaatacagagccggactgaagaacattgct
aacacactgatggccaaggcattgcaggaatgtcccaactcgggaatcctatggtcagaa
gcaattttccttgaggcaagaccacagcgaaagaccaaaagtgtggatgccctgaagaag
tgtgagcacgaccctcatgtcctgttggctgtagccaagttgttctggagcgaacgtaaa
ataaccaaggcccgagaatggttccatcggacagtgaagatagattcagacctgggggat
gcctgggctttcttttacaaattcgagctccagcatggcactgaggagcagcaggaggag
gtgaagaagcgctgtgagaatgctgagccccgccacggagagctgtggtgcgaggtgtcc
aaggatatcgagaactggcagaaaaaaattggagaaatccttgtacttgtggcagccaaa
attaaaaatgccttctag
DBGET
integrated database retrieval system
