KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102444490
Entry
102444490         CDS       T02980                                 
Symbol
HELQ
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:pss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pss03400]
    102444490 (HELQ)
Enzymes [BR:pss01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     102444490 (HELQ)
DNA repair and recombination proteins [BR:pss03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    102444490 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF4332 DNA_pol_lambd_f DUF3135 DGKD_4H DUF7026
Other DBs
NCBI-GeneID: 102444490
NCBI-ProteinID: XP_006110948
Ensembl: ENSPSIG00000015865
LinkDB
Position
Unknown
AA seq 1017 aa
MKYNNDSEEDMFGDYDSFSGNDSLLAQVDNMEQECIQSIDMTSYTKNKEDQAVSEPMFED
LQLQNAKSMELVFSAAGNGTGFKTEEGSNFWRTTNEQENRALDSGDCISEELPSSQLLYF
QEMSKTSVDSRKPSDTKERGKDMNFCLDKMLNQSCPHNAEHNKINNVLSPSTTSSLSKRQ
SLKDHLKNTMTGNAKAQTPQFSRTKQLKEAVLSEEICVAKKTIETSSVDIGPFYGLPSKV
KDLLVRFRGIEKLYEWQHTCLTLESLQQRKNLIYSLPTSGGKTLVAEILILQELLCRQKD
VLMVLPYVAIVQEKVWALSSFGIELGFLIEEYAGSKGRFPPIKRRMKKSLYIATIEKGHS
LVNSLIETGRVSDLGLVVVDELHMLGEGSRGATLEMILAKILYTSKTTQIIGMSATLNNV
GDLQQFLQAEYYTNNFRPVELKEYVKIRDGIYEVDNKAENGLTFSRLLNFKYASNLQKMD
PDHLIALVAEVIPNYSCLVFCPTKKNCENVAEMICKYLNKEYRNHRENEKHDLIKDLKNI
GKGHLCPVLKRTIPFGIAYHHSGLTSDERKHIEEAYSAGVLCLLTCTSTLAAGVNLPARR
VILRAPYIATEFLKKNQYKQMIGRAGRAGIDSAGESILIVQEKDKNLVRDLINSPLENCY
SSLFVEYTKGFQGLLLSLVGLKIARNPEEIYHFMCSTLFGVQQQFLSKEKSLSDITREAL
ECLIEKGLLKGKMISEKEQKSQSNLEITQLGQATYKGSIDLAYCDALYRDLKKGLQGLVL
ESCLHLLYLTTPYDMIYHCNPDWMIYFRQFSHLSSVEQKVAATVGVSESFITKKASGQAI
KKDVDNSVVNRLYLSFVLYDLLKETNIWNVSEKFNMSRGYVQNLLNSAASFSSCVLHFCE
EMEEFWVYKALLTELTKRLTYCVKAELIPLMEVAGVLESRAKQLYDSGYKTLAHLANANP
ETLVKMIEHLSRRQARQIVSSAKMLLSEKAEALQEEVEELLKVPKDPSEDIILITLP
NT seq 3054 nt   +upstreamnt  +downstreamnt
atgaaatataataatgacagtgaagaggacatgtttggtgactatgacagcttttctgga
aatgattctttgttagctcaagttgataatatggagcaagaatgtattcaatctattgac
atgacttcatatactaaaaacaaggaagaccaagctgtttcagagcccatgtttgaggat
cttcagttacaaaatgccaaaagcatggaactagttttttctgctgcaggaaatggtaca
ggcttcaaaactgaagaagggagtaatttctggaggaccacaaatgaacaagagaacagg
gctctagactctggagactgtatttcagaagagttgccatcttcacagcttctatatttt
caggaaatgagtaagacctcagttgattctagaaaaccatcagatacaaaagagcgtggt
aaagacatgaatttttgccttgataaaatgttgaatcagtcttgtccccataatgcagaa
cacaacaaaataaataatgtattgtccccaagcaccacatccagcctgagtaaaagacag
agtctcaaagatcacctcaaaaatactatgactggaaatgccaaggctcagactccacaa
ttttctagaactaaacagctcaaagaagctgttctgtcagaagaaatttgtgttgccaag
aaaaccattgaaacgtcttctgttgacattggcccattttatgggttacccagtaaagtt
aaagatctcttagtccgcttccgaggaattgagaaactttatgagtggcagcacacttgc
ttaacattagaatctctgcagcaaagaaagaacttaatatattcattgccaaccagtggt
ggaaaaacacttgtagctgaaattttaattcttcaagaattactctgcagacagaaagat
gttttaatggttctgccatatgtggctattgtccaagaaaaggtttgggccttatcaagt
tttggaatagagctaggcttcttgattgaagaatatgcaggaagtaaaggaagatttcct
ccaatcaaaaggagaatgaagaaatcactgtacattgctactatagagaaaggacacagc
ctagtgaactccttgattgaaacaggaagagttagtgacctgggtttagtcgtagtagat
gagttgcacatgcttggtgaggggagtcgtggagcaacactggaaatgattcttgcaaaa
attctctacaccagcaaaactactcagatcattggaatgagtgcaacattaaataatgtt
ggagacctgcagcagttcctgcaagcggagtattacactaataattttagaccagtagaa
ttaaaggagtatgttaaaatacgagatggtatctatgaagttgacaacaaagcagagaat
ggccttactttttcacgtcttcttaatttcaagtatgctagtaatctgcagaagatggac
cctgaccatcttattgccttggtggcagaagtcattccaaattattcctgtcttgtcttt
tgtccgaccaaaaaaaactgtgaaaatgtagctgaaatgatatgcaagtacctgaacaag
gaatatagaaatcacagggaaaatgagaaacatgatcttattaaggacttgaagaatatt
ggtaagggacatctctgtcctgttctaaagcgaaccattccatttggtattgcctaccat
cacagtggcctcaccagtgacgaaaggaaacatatagaggaggcttattcagcaggtgtc
ctgtgccttcttacttgcacatctactttagctgctggagtcaacctgccagctcgaagg
gttattttaagggctccctatattgctacagagtttctgaagaagaaccagtataagcag
atgattggcagagctggtcgagctggtatcgacagtgctggtgaaagtattcttatagtg
caagaaaaagacaaaaatctggttcgggatttaataaacagtcctttggagaactgttac
agcagcctcttcgttgaatacactaagggattccaaggtctgctcctatctttggttgga
ttaaagattgcaagaaaccctgaagaaatctaccactttatgtgcagcacgttgtttggt
gttcagcaacagtttctgtctaaagaaaagagcctctcagatataactagagaagcactg
gaatgcctgatagaaaaaggactccttaaaggaaaaatgatctctgaaaaggaacagaaa
tcccaaagtaatctagagatcacacagttgggtcaagctacctacaaagggtctatagat
ttggcctattgtgatgctctctacagagatttgaaaaaagggcttcaggggctggttctt
gagagctgccttcatcttctgtatctgacaactccctatgacatgatttatcactgtaac
ccagactggatgatctattttagacaattcagccatctcagttcagtagagcagaaggta
gcagctactgtaggagtctctgaaagttttattacgaagaaagcttctggacaagccatc
aaaaaagatgtggacaacagtgttgtaaatagactgtatctgtcctttgttctttatgac
ctattgaaagagaccaacatatggaatgtttcagaaaaatttaacatgtctagaggatat
gttcaaaatctcctgaactctgctgcctcattttcctcctgtgtgctgcacttttgtgag
gagatggaggaattttgggtttataaagccctgctgacagaacttacaaagcgactgacc
tattgtgttaaggcagaactcatccctcttatggaggtggcaggggttttagagtctcga
gcaaaacagctgtatgattcaggatataaaactctagcacatctagctaatgcgaatcca
gaaacattggtcaagatgatcgagcatttgtcacgacgtcaagctagacaaattgtttca
tctgcaaagatgctgctaagtgaaaaagctgaggctctacaagaagaagttgaagaactg
ttgaaggtgcctaaagatccatctgaggacatcatcctaataactttgccataa

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