KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102444490
Entry
102444490         CDS       T02980                                 
Symbol
HELQ
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:pss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pss03400]
    102444490 (HELQ)
Enzymes [BR:pss01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     102444490 (HELQ)
DNA repair and recombination proteins [BR:pss03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    102444490 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII DUF7898 HHH_5 DUF4332 DNA_pol_lambd_f RIMB1_N DUF3135 DUF7026 DGKD_4H EFCAB5_C Cas_TM1802
Other DBs
NCBI-GeneID: 102444490
NCBI-ProteinID: XP_075785623
Ensembl: ENSPSIG00000015865
LinkDB
Position
5:complement(11869923..11915912)
AA seq 1065 aa
MEGSGPVVRRKSRPVSARKRSRDRARSPPARKRASPGAGQELQPAPASPEYNNDSEEDMF
GDYDSFSGNDSLLAQVDNMEQECIQSIDMTSYTKNKEDQAVSEPMFEDLQLQNAKSMELV
FSAAGNGTGFKTEEGSNFWRTTNEQENRALDSGDCISEELPSSQLLYFQEMSKTSVDSRK
PSDTKERGKDMNFCLDKMLNQSCPHNAEHNKINNVLSPSTTSSLSKRQSLKDHLKNTMTG
NAKAQTPQFSRTKQLKEAVLSEEICVAKKTIETSSVDIGPFYGLPSKVKDLLVRFRGIEK
LYEWQHTCLTLESLQQRKNLIYSLPTSGGKTLVAEILILQELLCRQKDVLMVLPYVAIVQ
EKVWALSSFGIELGFLIEEYAGSKGRFPPIKRRMKKSLYIATIEKGHSLVNSLIETGRVS
DLGLVVVDELHMLGEGSRGATLEMILAKILYTSKTTQIIGMSATLNNVGDLQQFLQAEYY
TNNFRPVELKEYVKIRDGIYEVDDKAENGLTFSRLLNFKYSSNLQKMDPDHLIALVAEVI
PNYSCLVFCPTKKNCENVAEMICKYLNKEYRNHRENEKHDLIKELKNIGKGHLCPVLKRT
IPFGIAYHHSGLTSDERKHIEEAYSAGVLCLLTCTSTLAAGVNLPARRVILRAPYIATEF
LKKNQYKQMIGRAGRAGIDSAGESILIVQEKDKNLVRDLINSPLENCYSSLFVEYTKGLQ
GLLLSLVGLKIARNPEEIYHFMCSTLFGVQQQFLSKEKSLSDITREALECLIEKGLLKGK
MISKKEQKSQSNLEITQLGQATYKGSIDLAYCDALYRDLKKGLQGLVLESCLHLLYLTTP
YDMTYHCNPDWMIYFRQFSHLSSVEQKVAATVGVSESFITKKASGQAIKKDVDNSVVNRL
YLSFVLYDLLKETNIWNVSEKFNMSRGYVQNLLNSAASFSSCVLHFCEEMEEFWVYKALL
TELTKRLTYCVKAELIPLMEVAGVLESRAKQLYDSGYKTLAHLANANPETLVKMIEHLSR
RQARQIVSSAKMLLSEKAEALQEEVEELLKVPKDPSEDIILITLP
NT seq 3198 nt   +upstreamnt  +downstreamnt
atggaggggagcggccccgtggtgcgcaggaagagccgccccgtctcggcccgcaagagg
agccgggaccgagcccgctccccgccagcccggaaaagagcgagtcctggggccgggcag
gagctgcagcccgcccccgccagccccgagtataataatgacagtgaagaggacatgttt
ggtgactatgacagcttttctggaaatgattctttgttagctcaagttgataatatggag
caagaatgtattcaatctattgacatgacttcatatactaaaaacaaggaagaccaagct
gtttcagagcccatgtttgaggatcttcagttacaaaatgccaaaagcatggaactagtt
ttttctgctgcaggaaatggtacaggcttcaaaactgaagaagggagtaatttctggagg
accacaaatgaacaagagaacagggctctagactctggagactgtatttcagaagagttg
ccatcttcacagcttctatattttcaggaaatgagtaagacctcagttgattctagaaaa
ccatcagatacaaaagagcgtggtaaagacatgaatttttgccttgataaaatgttgaat
cagtcttgtccccataatgcagaacacaacaaaataaataatgtattgtccccaagcacc
acatccagcctgagtaaaagacagagtctcaaagatcacctcaaaaatactatgactgga
aatgccaaggctcagactccacaattttctagaactaaacagctcaaagaagctgttctg
tcagaagaaatttgtgttgccaagaaaaccattgaaacgtcttctgttgacattggccca
ttttatgggttacccagtaaagttaaagatctcttagtccgcttccgaggaattgagaaa
ctttatgagtggcagcacacttgcttaacattagaatctctgcagcaaagaaagaactta
atatattcattgccaaccagtggtggaaaaacacttgtagctgaaattttaattcttcaa
gaattactctgcagacagaaagatgttttaatggttctgccatatgtggctattgtccaa
gaaaaggtttgggccttatcaagttttggaatagagctaggcttcttgattgaagaatat
gcaggaagtaaaggaagatttcctccaatcaaaaggagaatgaagaaatcactgtacatt
gctactatagagaaaggacacagcctagtgaactccttgattgaaacaggaagagttagt
gacctgggtttagtcgtagtagatgagttgcacatgcttggtgaagggagtcgtggagct
acactggaaatgattcttgcaaaaattctctacaccagcaaaactactcagatcattgga
atgagtgcaactttaaataatgttggagacctgcagcagttcctgcaagcggagtattac
actaataattttagaccagtagaattaaaggagtatgttaaaatacgagatggtatctat
gaagttgacgacaaagcagagaatggccttactttttcacgtcttcttaatttcaagtat
tctagtaatctgcagaagatggaccctgaccatcttattgccttggtggcagaagtcatt
ccaaattattcctgtcttgtcttttgtccgaccaaaaaaaactgtgaaaatgtagctgaa
atgatatgcaagtacctgaacaaggaatatagaaatcacagggaaaatgagaaacatgat
cttattaaggaattgaagaatattggtaagggacatctctgtcctgttctaaagcgaacc
attccatttggtattgcctaccatcacagtggcctcaccagtgacgaaaggaaacatata
gaggaggcttattcagcaggtgtcctgtgccttcttacttgcacatctactttagctgct
ggagtcaacctgccagctcgaagggttattttaagggctccctatattgctacagagttt
ctgaagaagaaccagtataagcagatgattggcagagctggtcgagctggtatcgacagt
gctggtgaaagtattcttatagtgcaagaaaaagacaaaaatctggttcgggatttaata
aacagtcctttggagaactgttacagcagcctcttcgttgaatacactaagggattacaa
ggtctgctcctatctttggttggattaaagattgcaagaaaccctgaagaaatctaccac
tttatgtgcagcacgttgtttggtgttcagcaacagtttctgtctaaagaaaagagcctc
tcagatataactagagaagcactggaatgcctgatagaaaaaggactccttaaaggaaaa
atgatctctaaaaaggaacagaaatcccaaagtaatctagagatcacacagttgggtcaa
gctacctacaaagggtctatagatttggcctattgtgatgctctctacagagatttgaaa
aaagggcttcaggggctggttcttgagagctgccttcatcttctgtatctgacaactccc
tatgacatgacttatcactgtaacccagactggatgatctattttagacaattcagccat
ctcagttcagtagagcagaaggtagcagctactgtaggagtctctgaaagttttattacg
aagaaagcttctggacaagccatcaaaaaagatgtggacaacagtgttgtaaatagactg
tatctgtcctttgttctttatgacctattgaaagagaccaacatatggaatgtttcagaa
aaatttaacatgtctcgaggatatgttcaaaatctcctgaactctgctgcctcattttcc
tcctgtgtgctgcacttttgtgaggagatggaggaattttgggtttataaagccctgctg
acagaacttacaaagcgactgacctattgtgttaaggcagaactcatccctcttatggag
gtggcaggggttttagagtctcgagcaaaacagctgtatgattcaggatataaaactcta
gcacatctagctaatgcgaatccagaaacattggtcaagatgatcgagcatttgtcacga
cgtcaagctagacaaattgtttcatctgcaaagatgctgctaagtgaaaaagctgaggct
ctacaagaagaagttgaagaactgttgaaggtgcctaaagatccatctgaggacatcatc
ctaataactttgccataa

DBGET integrated database retrieval system