Pelodiscus sinensis (Chinese soft-shelled turtle): 102444790
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Entry
102444790 CDS
T02980
Symbol
BRAT1
Name
(RefSeq) BRCA1-associated ATM activator 1 isoform X4
KO
K23112
BRCA1-associated ATM activator 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pss03400
]
102444790 (BRAT1)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102444790 (BRAT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
Ric8
RTP1_C1
TnpV
Motif
Other DBs
NCBI-GeneID:
102444790
NCBI-ProteinID:
XP_006112950
Ensembl:
ENSPSIG00000007017
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
MDRECAQLLPPVCAVLGDSRQLVADDTFLEKFLDWFKTLTETESSLHLLQENPCLTELIT
CVLKLKDPSSSTLSFILRLTGIFTASESCFQYLQQRELLNSLFGEEGPLSSALWEEASVR
SGWVQGVHSMTQHQSAIHFLCNCGAIDVIFTLQGDPSLFVASAANRLLVHILTFSLQSFQ
TKPVNIKDCDWPICAQKLIPHLEESLKSSSASRIKQSLKLLTSVFGCCHDLWTEVLWSQL
SEPITYLLEKEPFNAGNSLVDLFLSMARSPVFSCPECSLWKSASYALEHLNPAQAGCLSV
GILKLQECPQAVKTQALSVLLQPMDCVLKAASQPLEYPGLLNNSLSDSATIETLLSCRSS
CASLLCQTLAHLEELLYLTYMPVNLPHIPLLKSVVTVLQFGTGLATPASPLGSKISRILI
GCFRVQRSALDILGAFSHWESHSVFMGSVSDILLAYLKSPDTSPTVLKKSFQATLKWLVR
LSEAPSSRDHWLQTEQFFRDLFLVLQKRLCSHCWEIRDSALEFLTLLVKHLREKEEFRQV
LVSSEVPKFTEDLLEDPESYVRASAVLAMGQLSFLTHLNSKIPSTENGDGKEVKKKSIVA
QLQEILVTDSEGFPRRAVISVFIDWLRDGHTDVLKDTEQFVSSVLQVVNCDLDWEVKAGG
LELAEVFSAKTLGRVGLAGCPYVSVVSAATRSTQLNESLQIFYRVKLFEFLFGALCDCDR
PVAQKACNILIALKAELCDENSLKEGLSAEHSFPEAHGIAWLEKTLRRWSSCAEPCPIGI
ANEAGSQNPNDILLVLRTIDLEGLNKSLNRSSDHIENSPQSLLQDILATVGTLEENEADC
Y
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggacagggagtgtgcgcagctcctgcctcctgtgtgtgcagttctaggagactcaagg
caacttgttgccgatgacacttttctagagaaatttctggactggtttaagactctaact
gaaacagaatctagcttgcacctgttacaggagaacccatgcttgacagaactcattact
tgtgtgctgaaactgaaagatccaagttctagcacactttcctttattctgagattaaca
gggatattcacagcttctgaaagctgcttccaatatttacagcagagggagctgttgaac
agtctctttggagaggaggggcctctcagcagtgctctgtgggaagaagcatctgtgcga
agtggctgggtccagggtgtgcacagcatgacacagcaccagagcgcaatccattttttg
tgcaactgtggagccatagatgtgatcttcactctacagggagaccctagcctgtttgtg
gcttcggctgccaatcggcttttagtgcacatactcaccttttctctacagtcattccag
actaaacctgtaaatataaaagactgtgattggccaatatgtgctcaaaagcttatacca
caccttgaagagtcccttaaatccagctctgcctctcgtatcaagcaatctttgaagctg
ctaaccagtgtatttggatgttgtcatgatctgtggactgaagtactttggtcacagcta
tcagaaccaattacatatctcttggagaaggagccattcaatgcagggaactcactggtg
gaccttttccttagcatggcaaggtctccagtgtttagctgccctgaatgtagcctgtgg
aaatcagcatcatatgctttggagcacttaaacccagctcaggctggttgtttgtcagtg
ggaatactgaagcttcaagaatgcccacaggcagtaaagacgcaagctctgagtgttttg
cttcagccaatggattgtgttctgaaagcagcctcccagcccttggaatatccaggtttg
ctgaataactctctgagtgattctgccactattgaaacactgctgtcctgcaggtcctct
tgtgctagtctcctgtgtcagacattggctcatctggaggagctgctgtacttgacctac
atgccagtgaatttgccccatatacctttgctgaagtctgtagtgacagtattgcaattc
ggtactggccttgcaactccagcatcccctctaggaagtaagatcagtagaatcttgatt
ggttgcttcagagttcagaggtcagcacttgacatcctgggagcgttctctcattgggaa
agccacagtgtttttatgggaagtgtgtctgacatcctccttgcatacctgaagagtcca
gataccagccctactgttctgaagaagtcatttcaagctacactcaaatggctggtgaga
ttgtcagaagcacctagctctagggatcactggctacagactgagcagtttttccgagat
ctgtttctggtgctgcagaaacgtttgtgcagccattgttgggaaatacgggactctgcc
ctggaatttctcaccctcctggttaaacatctgagagagaaagaggagttcaggcaagta
ctcgtctcttcagaggtgccaaaattcacagaggatcttcttgaagacccagagagttac
gtgcgagctagtgctgtgttggccatgggacagctgtccttcctcactcatctcaactca
aagatacctagcacagaaaatggagatggcaaagaggtaaagaagaaaagcattgtagca
caacttcaagaaatcttagtgacagactcagagggcttccctagaagagctgtgatcagt
gtcttcattgactggctgagagacggccacacagatgtactgaaagacactgagcagttt
gtctccagcgtgctccaagttgtgaactgtgacttagactgggaagtcaaagctggtggt
ttggaactagctgaagttttctctgccaagacacttggacgggttggccttgctggatgc
ccatatgtttctgtcgtctctgctgccacccgctctactcagctgaacgaatcactgcag
atattctaccgagtgaaactgtttgagttcctgtttggtgctttgtgtgactgtgacagg
ccagtggctcaaaaagcctgcaatatcctcattgccttgaaagctgagctctgtgatgag
aacagcttgaaggagggactgagtgcagaacactcatttccagaagcacatgggattgct
tggttagaaaagactctgagaagatggagttcctgtgctgaaccctgccccattggtatt
gctaatgaggctggctcccaaaacccaaacgatattctgttggttttgagaacaatagac
ttagaagggctgaataagtctctgaacagaagcagtgaccacattgaaaacagtcctcag
tctctcttgcaggacatcctggccactgtggggactttggaggagaatgaagctgactgc
tattaa
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