Pelodiscus sinensis (Chinese soft-shelled turtle): 102444926
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Entry
102444926 CDS
T02980
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pss03036
]
102444926 (CHD5)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102444926 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDII_SANT-like
Helicase_C
CHDCT2
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
DEAD
PHD_2
AAA_22
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
102444926
NCBI-ProteinID:
XP_025041239
Ensembl:
ENSPSIG00000006414
LinkDB
All DBs
Position
Unknown
AA seq
2093 aa
AA seq
DB search
MGMERVPRSTDAMFDLLLWREMAELCTSCLFSGSPLQSPSWKVMQGTAQAALGDGRSPEE
LTGCCWFLEAGNSADEEDGVLEGLEDFYPEEQVPAQKKKKPKKLKENKTAKVKRRKKEGS
NEESENEKSESEGSDYSPDKKKRKKLRGKKEKKAKQKKKEEEEEDNEEGGLKEPKSSAQL
MEEWGLDEVDYIFSKEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSA
NNPFKGSGSPPASAVAPVAAAVEKVTITPQLSVSPQPSAPPMTVRKAKTKEGKGPGVRKK
IKGSKDGKKKGKGKKQVGLKFRFGGIASKRKKGSSSEEEEREESDFDSASINSSSVRSEC
SAGLGKRGTRRRKKKRIDEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELE
KAPEGKWSCPHCEKEGIQWEPKEEEEEDEEGGEEEEDDHMEFCRVCKDGGELLCCDTCPS
SYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWVWREPPAPFLSMLPPPELGLA
VPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDY
GSGDEESKSEKRKNKDPQYAKMEEKFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKD
LPYDQCTWEIDDIDIPYYENLKQVYWNHRELMLGEDLQAPKRLNKKGRKLKEEKLEKPPE
TPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTI
VFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRAVIRENEFS
FEDNAIRSGKKVFRMRKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQ
SKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQ
IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGG
GNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKL
RDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCF
LLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEE
RITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRIA
LPEPVPPFPEAPSSKGGAVTPNMKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQD
ATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQ
QEDLARNLGKGKRIRKQVNYNDASQEDQGTCGCCPQEDEDFEERPEGQSGRRQSRRQLKS
DRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEK
EFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNG
KYSTPDLIPEGKKASEVVSSDPNTPVPASPAHVQTGPVPQPDKTETPLVFQEEKELIELK
PKKPSESQGPASAEKAESDDAQESPGSDEKPREEKREESEEPEPSPEQTPVKDEAIQGKE
KPLETPEFKAFQGKGEDKEFKPEDAKAEEKEPGETQQNGEKEEEEDGKKEDKNINFRFMF
NIADGGFTGNRAGGWDSIPVTRTGLSEGWGAGGSPDSAVSQLLEQALVMEEQLRRAAYLN
MSQDPNPPAMALNARLAEVECLAESHQHLSKESLAGNSRPTGSGAAAEPLWHKPNWGWQP
REGAAGFWPRLVAFPACQHSSLPSARGACVESRPPLPTTAVSCPVKGSLPPPAPVSPPPL
GGCRESRAPVHRRLCPLPHEGGTGRAGPRCIGACVPSPTRGAPGEQGPGASAPVSPPPRG
GCGRAGSRCIGACVAVLNQLEELLSDMKADVTRLPSLQPRIPPVAARLQMSERRILXXXX
HSPNNPCFLLFLQGSFGSSQLYSNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
6282 nt
NT seq
+upstream
nt +downstream
nt
atgggaatggagcgcgtgccgagaagcacagatgcaatgtttgaccttctgctttggagg
gaaatggctgagctctgcaccagctgcctcttcagtggcagcccattgcagtcgccatct
tggaaggtcatgcagggaacagcacaggctgccctaggggatggaaggagccccgaagag
cttactggctgctgctggttcttggaagcagggaactctgcagacgaggaggatggggtg
ctggaagggctggaggacttttatccggaggagcaggtgcctgcgcagaagaaaaagaaa
cccaaaaagctgaaggaaaacaagacggctaaagtcaagaggaggaagaaagaggggagt
aatgaggagtctgaaaacgagaaatcggagagcgaagggagcgactattcgcccgacaaa
aagaagaggaagaagctcagaggaaagaaggagaaaaaagccaagcagaagaagaaagag
gaagaggaggaggataacgaggaagggggtttaaaggagcccaagagctcagcacagctg
atggaggaatggggcctggatgaagtggattatattttctccaaagaagattaccacacg
ctgaccaattacaaggctttcagtcagttcctcaggccactcatcgccaagaagaatccc
aaaatccccatgtccaagatgatgacagtgctgggcgccaaatggcgggaattcagcgcc
aacaacccattcaagggcagtggcagtccccctgcctcagcagtggctccagtggcagca
gctgtggaaaaagttaccatcacaccccagctttccgtcagccctcagccatctgcgccg
cccatgaccgtcaggaaagcgaaaacgaaggagggcaaaggtccaggagtgcggaagaaa
atcaagggctccaaagacgggaagaaaaaagggaaggggaaaaagcaggtggggctgaaa
ttccgctttggaggcattgccagcaagaggaaaaaaggctcctcaagtgaagaggaggag
cgggaggagtcggacttcgacagcgccagcatcaacagctcctcggtgcgctccgaatgc
tcggcgggcctggggaagagagggacgcggcggagaaagaaaaagaggattgacgaaggg
gatgggtatgagaccgaccaccaggattactgcgaagtctgccagcagggaggggagatt
attctgtgtgacacatgcccccgcgcctaccacctcgtctgcctggaccccgagctggag
aaagccccggagggcaagtggagctgcccgcactgtgagaaggaagggatccagtgggag
ccgaaggaggaggaggaggaggacgaggagggaggcgaagaggaggaggatgaccacatg
gagttctgccgtgtgtgtaaggatggaggggagctgctgtgctgtgacacctgcccgtct
tcgtatcacctgcattgtctgaacccgcctctgccggaaatcccaaacggtgaatggctc
tgcccgcgctgtacatgccctcccttgaaaggcaaagtccaacgcatcctgcactgggtc
tggagagagcccccggcccccttcctgtctatgctccctccgccggagctgggtctggct
gtccctccgccgaagcccctggaagggattccggagcgtgagttctttgtgaagtgggca
ggactctcctattggcactgctcctgggtgaaggagctgcagctggagctctaccacacc
gtgatgtaccgcaactaccaaagaaagaacgacatggatgagcccccggccttcgactac
ggctctggggacgaggagagcaagagcgagaagcggaagaacaaagacccgcagtacgcc
aagatggaggagaagttctaccgctacggcatcaaacccgagtggatgatgattcaccgc
atcttgaaccacagcttcgataaaaagggagacgtccattacctgatcaaatggaaagat
ctgccctacgaccagtgcacttgggagattgatgacatagacatcccgtactatgaaaac
ctgaaacaggtctactggaaccacagggagctgatgctgggggaagatctccaagcacca
aagaggctgaacaagaaagggagaaaactgaaggaagaaaaactagaaaaacctccagaa
actcctattgttgatcccacagtgaaattcgacaagcagccgtggtacattgatgccaca
ggaggcaccttgcacccctaccagctggaaggactgaactggctgaggttttcctgggcc
cagggaaccgatactattcttgctgatgagatgggcctcgggaagacggtgcagaccatt
gtgttcctgtactcgctgtacaaggagggccactcgaaagggccgtatctggtcagtgcc
cctctctccaccatcatcaactgggagcgagaatttgagatgtgggccccagacttctac
gtggtgacctacacgggggacaaggaaagccgggccgtgatccgagaaaacgagttctcc
tttgaggacaatgccatccggagtgggaagaaggttttccggatgagaaaagaagcccag
attaaattccacgtcctgctcacgtcctatgagctgatcactattgatcaggctgttctg
ggctccatagagtgggcatgtctggtggtggatgaagctcacaggctgaagaacaaccag
tccaaattctttagggtgctgaatagctataagattgactacaagctgctgctgacggga
acgccgctccagaacaacctggaggagctttttcacctgctcaatttcctcaccccggag
aggtttaacaacctggaagggttcctggaagagtttgctgacatctccaaggaggaccag
atcaaaaaactccacgacctcctgggtccccacatgctgcggcggctgaaggccgacgtg
ttcaagaacatgcccgcgaagacggagctgattgtgcgggtggagctcagccagatgcag
aagaagtactacaagttcatcttgacacggaattttgaagccctgaattccaaaggcggt
gggaaccaggtgtcgctgctcaatatcatgatggatctgaagaagtgttgtaatcacccg
tacctctttcccgtggcggccgtggaggcgcccgtgttgccaaatggatcctacgacggg
aattctttggttaaatcttctgggaagctgatgctgctgcagaagatgctgaagaaactg
cgagatgggggtcacagggtcctgatcttctcccagatgacgaaaatgctggatttgctg
gaggatttcctggagtacgagggttataagtacgagcggatagacggcggcatcactgga
ggcctgcgccaagaagccattgacaggtttaatgcgcccggggcccagcagttttgtttc
cttctctccacccgcgctgggggcctgggcataaacctggcgacggccgacaccgtcatt
atttacgactcggattggaatccccacaacgacatccaggccttcagcagggctcaccgc
atcggccagaacaagaaggtgatgatctaccgctttgtgacgagggcctccgtggaggag
cgcatcacccaggtggccaagcgcaagatgatgctgacccacctggtggtgcgcccgggg
ctgggctccaagtcgggctccatgacgaagcaggagctggacgacattctcaagtttggg
acggaggagctcttcaaagacgacgtggaaggcatgatgtcgcagggccagcggatcgct
ctgccggagccggtacccccgttccccgaagcaccatcctccaaagggggcgcagtgacc
cccaacatgaaaaagaaacacggcagcacgccgccaggggacaacaaggacgtggaggac
agcagcgtgatccactacgatgacgctgccatctccaagctgctggaccgcaaccaggac
gccacggacgacaccgagctgcagaatatgaacgagtatctcagctccttcaaagtggcc
cagtatgttgtgcgagaagaggacggtgtggaggaggtggagcgtgagatcatcaagcaa
gaggagaacgtggaccctgactactgggagaagctgctcaggcaccattacgagcagcag
caggaagacctggcccggaacctcggcaaagggaagaggatccgcaaacaggtcaattac
aacgacgcctcccaggaggaccaaggtacgtgcggctgctgcccacaggaagatgaagac
ttcgaagaacggcctgaaggtcagagtggcaggagacagtcgcggcggcagctgaagagc
gaccgagacaagcccctcccccctctgctggcaagagttggggggaacatcgaggtgctg
ggcttcaacgcgcggcagcgcaaggccttcctgaacgccatcatgcggtggggcatgccg
ccccaggacgccttcaactcgcactggctggtccgagacctccgcgggaaaagcgagaag
gagttcagggcctacgtctctctgttcatgagacacttgtgtgagcctggcgcagacggt
gccgaaacctttgcggacggcgtcccccgggaagggctgtcgcgccagcacgtcctgacc
cgcatcggggtgatgtcactagtaaggaagaaggtccaggagtttgagcacgtcaacggg
aagtacagcacccctgatctgatccccgagggcaagaaggccagcgaggttgtctcttcc
gaccccaacacccctgtgccagccagcccggcgcatgtgcaaaccgggcccgtgccacag
ccagacaaaacagaaacgcctctggtgttccaagaggaaaaggaactaatagagctgaag
cccaagaagccatctgagagccagggcccagccagtgcggagaaagccgagagtgacgac
gcccaggagagccctggcagcgacgagaagccgagggaagagaagagagaggagagcgaa
gagcctgagccgtcgcccgagcagacgccggtgaaagacgaagcaattcaaggaaaggaa
aagcccctggaaacgccagaattcaaggccttccaaggcaaaggggaagacaaagaattc
aagccagaggacgccaaggcggaggagaaggagccaggcgagactcagcaaaacggtgaa
aaggaggaagaggaggatgggaagaaggaggataaaaacatcaacttcagattcatgttc
aatatcgcggatgggggcttcacaggtaacagggctgggggctgggacagcatcccagtc
actcgtacagggttgtcagagggctggggggcgggtggaagccctgactcggctgtctct
cagttgctggagcaggccctggtgatggaggagcagctgcgaagggctgcgtacctcaac
atgagccaggaccccaatcccccagccatggccctgaacgcccgtctggcggaggtggag
tgcctggccgagagccaccagcacctctccaaagagtccctggcggggaacagccggccc
acgggctctggggccgcggcggagcccctctggcacaaacccaactggggctggcagccc
cgggagggcgcagcgggattctggccccgccttgtggcattccctgcctgtcagcacagc
agcctgccctcagccaggggagcgtgtgtggagagccgccccccactgcccaccacagcg
gtgtcctgccctgtgaagggatctctgcccccgccggcgcctgtgtcccctcccccatta
ggggggtgtcgggagagcagggccccggtgcatcggcgcctgtgtcccctcccccacgag
gggggcaccgggagagcagggccccggtgcatcggcgcctgtgtcccctcccccacgagg
ggggcaccgggagagcagggccccggtgcatcggcgcctgtgtcccctcccccgcgaggg
gggtgcgggagagcagggtcccggtgcatcggtgcctgtgttgcagttctgaaccagctg
gaggagctgctgagcgacatgaaggcggacgtgacccgcttgccctccctgcagcccagg
attcctccggtggccgctcgcctgcagatgtcggaaaggaggatccttagnnnnnnnnnn
cacagcccaaacaacccttgttttctcctgtttctccagggctccttcggctcctcccag
ctctacagcaacaactttgggccaaacttccgaggccccggacccggtgggattgtcaac
tacagtcagatgccgctgggaccttacgtgaccgatatttag
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integrated database retrieval system
