Pelodiscus sinensis (Chinese soft-shelled turtle): 102444966
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Entry
102444966 CDS
T02980
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X2
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pss03041
]
102444966 (DDX1)
03016 Transfer RNA biogenesis [BR:
pss03016
]
102444966 (DDX1)
Enzymes [BR:
pss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102444966 (DDX1)
Spliceosome [BR:
pss03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102444966 (DDX1)
Transfer RNA biogenesis [BR:
pss03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
102444966 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
102444966
NCBI-ProteinID:
XP_006137662
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKMGKTTIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWH
GCRATKGVTKGKYYYEVSCHDQGLCRIGWSTMQASLDLGTDKFGFGYGGTGKKSHNKQFD
SYGEEFTMHDTVGCYLDVDKGQIKFSKNGKDLGLAFEIPPHIKSQALFASCVLKNAELKF
NFGEEDFKFPPKDGFIALCKAPDGNVVKSQHTGSAQVAQTKNFPNAPKALIVEPSRELAE
QTLNNIKQFKKNVDNPKLRELLIIGGVAARDQLSILENGVDIVVGTPGRLDDLVSTGKLN
LSQIRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDKQWERLGKNHVRTDEVHAKDNTRPGGN
SPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYLIQQGGGPDRKGHQF
SCVCLHGDRKPHERKQNLDRFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSNRGKGCYNTRLKEDGGCTIWYNEMQLLG
EIEEHLNCTISQVEPDIKVPLDDFDGKVTYGQRRAAGGGTYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRMF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttctccgagatgggggttatgccagagatagctcaagctgtggaggagatg
gactggcttcttcccacagatattcaagctgagtctatcccattgattctaggaggtggc
gatgtgcttatggctgcagaaactgggagtggaaagactggtgctttcagtatcccagtt
atccagattgtttatgaaactcttaaggaccagcaggaaggcaaaatggggaaaacaact
atcaaaactggtggggcagtgcttaacaaatggcagatgaacccatatgatagaggatca
gcttttgcaattggatcagatggtctgtgttgccaaagcagagagataaaggaatggcat
ggatgcagagcaactaaaggagtgactaaaggaaaatattactatgaagtatcctgtcat
gaccagggcttgtgcagaattgggtggtccactatgcaggcttcactggatttgggcact
gacaaatttggctttggctatggtggaactggaaagaagtcacataacaaacagtttgat
agttatggtgaggaattcactatgcatgatacagttggatgctatctagatgtagacaaa
ggacaaattaagttctctaaaaatgggaaagaccttggccttgcatttgaaatcccacca
catataaaaagccaagcactttttgcatcctgtgttctgaagaatgctgaattgaagttc
aactttggcgaagaagactttaaatttccaccaaaagatggctttattgctctttgcaaa
gcaccagatggcaatgttgtgaaatcgcagcacacgggaagtgcacaagtggctcaaaca
aagaactttcctaatgctccaaaagcattaattgtggaaccgtccagagagttagcagaa
caaactttgaacaacataaaacagttcaaaaaaaatgttgataatcctaaattaagagag
ctcctgattattggtggtgttgctgcaagagatcagctttctattctggaaaacggtgtg
gacattgttgtaggaacccctggaagattggatgacttggtgtcaactggaaagcttaac
ttatctcaaattagattcctggttcttgatgaagctgatggcctccttctccagggttat
tcagatttcataaacagaatccacagtcagattcctcagataacttcagatggaaaaaga
ctgcaggttattgtgtgttctgcaactttacattcttttgatgtgaagaaactgtcagag
aagatcatgcatttccccacctgggttgacttaaaaggagaggattctgtcccagaaact
gtccaccatgttgttgttcctgtgaatcccaaaactgacaaacagtgggaaaggcttgga
aagaatcatgtccggactgatgaggtacacgcaaaagataatacaaggcctggtggtaac
agtccagaaatgtggtctgaagctattaaaatactgaagggagagtatactgttcgagca
attaaggaacacaagatggatcaagcaattattttctgcagaactaaaatagactgtgat
aacatggagcagtacttaatacaacagggaggaggtccagataggaaaggacatcagttt
tcgtgtgtctgtctgcatggtgacagaaaacctcatgaaagaaaacaaaacttggacaga
tttaagaaaggagatgtccgattcttgatctgcaccgatgtagctgctagaggaattgat
atccatggtgttccttatgttatcaatgtcacgcttcctgatgaaaagcaaaactatgtt
catcgaattgggagagtaggcagagctgaaagaatgggtctggcgatttccctcgtggca
acagaaaaagagaaggtgtggtatcatgtttgtagtaaccgtgggaagggttgctataat
actaggctgaaggaagatggaggttgcaccatatggtacaatgagatgcagttgctggga
gagattgaagaacatctgaattgtactatttcccaagttgagccagatataaaagtaccg
ttagatgactttgatgggaaggttacatatggacaaagaagggctgcaggcggtggaacc
tataaaggccatgtggatattttggcacctacagtacaagagttggccgcccttgaaaag
gaggctcagacatctttcttacatcttggctaccttcctaaccagctgttcagaatgttt
tga
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