Pelodiscus sinensis (Chinese soft-shelled turtle): 102445005
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Entry
102445005 CDS
T02980
Symbol
POLR2B
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03020
RNA polymerase
pss03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102445005 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
102445005 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pss03021
]
102445005 (POLR2B)
03400 DNA repair and recombination proteins [BR:
pss03400
]
102445005 (POLR2B)
Enzymes [BR:
pss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102445005 (POLR2B)
Transcription machinery [BR:
pss03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
102445005 (POLR2B)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
102445005 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
102445005
NCBI-ProteinID:
XP_006128041
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDL
QAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVD
ITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLDPGGYFII
NGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGA
KKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDE
AFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGY
MVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGK
DFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNS
PIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEE
WSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDI
REREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDT
LEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSA
MGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTV
YNXEDSVIIFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGMRHAIYDKLDDDGLIA
PGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSETGIVDQVMVTLNQEG
YKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIIINPHAIPSR
MTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEVLYNGFTGR
KITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQI
AHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYAC
KLLFQELMSMSIAPRMMSV
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatgatgaagatgatgatgaaatcactccagatctatggcaagaagcatgctgg
atagttattagctcctattttgatgagaagggcttggtccgacaacagctggattctttt
gatgagttcattcagatgtctgtgcagagaattgtagaagatgcaccacctattgattta
caagctgaagctcagcatgctacaggggaagttgaagagccgccacgatatttgctgaag
tttgaacaaatctatctctccaaacctacgcattgggaaagagatggtgcaccttcaccc
atgatgcccaatgaagccagactgagaaatcttacgtattctgcccccttgtatgtggac
ataactaaaacagttattaaagaaggagaggaccagttacagacacagcatcagaaaacc
tttataggaaaaattcctatcatgctccgttcaacatactgcctgttgaatggcttgact
gatcgtgatctctgtgaactgaatgaatgccctcttgaccctggtggctatttcattata
aatggatcagaaaaggttttgattgctcaagagaagatggctacaaacacagtgtatgtc
tttgcaaaaaaagattcaaaatatgcttacacaggagagtgtagatcctgcctggagaat
tcctctcgaccaacaagtactatatgggttagcatgctggccagaggagggcagggtgca
aagaagagcgctataggtcagcgcattgtagccactctgccatacatcaaacaagaagtg
cccatcattattgttttccgtgcattaggttttgtatccgacagagacattctggagcac
ataatttatgactttgaagatcctgagatgatggaaatggtcaaaccttccttagatgaa
gcatttgtcattcaggaacagaatgttgcattaaacttcatcgggtcaagaggtgcaaag
cctggtgtgaccaaagagaaaagaataaagtatgcgaaagaagtcttacagaaggagatg
cttccacatgttggtgtcagtgacttttgtgaaaccaaaaaggcctattttctggggtac
atggttcatagattactactggcagctctgggcagaagagaactggatgacagagatcat
tatggcaacaaaagactagatctggcagggccgttgcttgcattcttgttcagaggaatg
tttaagaatttgctcaaagaagtgagaatatacgcacagaaatttattgacagagggaaa
gattttaacctggaactggcaattaagacaaggattatatcagatggtttgaagtactcg
ttagctactggaaactggggtgatcagaagaaagctcaccaggccagggcaggagtctct
caggtgttaaaccgcctgacctttgcatctacgctttcccacttgagacgcttgaattct
ccgattggtagagatggcaaactagcaaagcccagacagctgcacaatacgttgtggggg
atggtctgtcctgctgagactcccgagggccatgcagtaggacttgtgaagaatttagcc
ttgatggcttacatttctgtggggtctcagccatctccgattctggaatttttagaagaa
tggagtatggaaaatctggaagaaatctccccagcagccattgcagacgcaaccaagatc
tttgttaatggctgctgggtaggaatacacaaagatccagaacagctgatgaacacacta
agaaaactacgtcgtcagatggacatcattgtgtcagaggtctctatgatcagggatatt
agggaacgagaaatccgcatctatactgacgctggcagaatctgcaggccgcttttaatt
gtagaaaaacaaaagctgctgttgaagaagaggcatattgaccaactaaaagaacgagag
tataacaactacagttggcaggacctcgtggccagtggtgtagtagaatacatcgatacg
ctagaagaagagactgtgatgctggcaatgactccagatgacctgcaggagaaaggagtc
gcttactgttcaacgtacacacactgtgagattcacccatccatgatcctaggagtttgt
gcatctattattcctttccctgatcacaaccagtctcctaggaacacgtatcagtctgct
atgggtaaacaggctatgggagtttatattacaaactttcacgtccgtatggatacacta
gcccatgtgctgtattaccctcagaaaccccttgtgactacacgctctatggagtacttg
cgatttcgagagctgccagcaggtatcaactcaattgtggctattgcttcatacactgta
tataattaggaagactcggtcattatttttttcagatctgtgttctatcgctcatataaa
gaacaagagtccaagaaaggatttgaccaagaagaggtttttgaaaaacctacacgtgaa
acttgtcagggtatgaggcatgccatctatgacaaactcgatgatgatggtttgatagca
cctggtgtacgtgtgtcaggagacgatgtcatcattggcaagacagtaactctgcctgag
aacgaagatgaactggaaagcactaacaggcggtacacgaagagggactgtagcactttc
ctacgaactagtgagactggtattgtggaccaggtcatggtaacccttaaccaggaagga
tacaagttttgcaaaattagggtgcgttctgtgagaatcccacaaattggagacaaattt
gccagcaggcatggtcagaagggtacctgtggtatccagtacaggcaagaggatatgcct
ttcacctgtgaaggtatcacccctgacataatcatcaatcctcatgccatcccttcccgt
atgacaattggtcacttgattgaatgtcttcaagggaaggtatcggcaaacaagggagaa
attggtgatgctacaccttttaatgatgctgtcaatgtgcagaagatttccaatctactc
tcagattatggctatcatctccgaggaaatgaggttctgtacaacggcttcactggacgc
aaaatcacatcacagatcttcattggtcctacttattatcagaggctgaaacatatggta
gatgacaaaattcattctcgagcaagagggcccattcagattcttaacaggcaaccaatg
gaaggcagatctcgagatggcggccttcgtttcggagagatggagcgagactgtcagatt
gctcatggagcagctcagtttttgagagagagattgtttgaggcttcagacccataccaa
gttcacgtttgcaatctgtgtggaataatggcaatagctaacacaaggacacacacttac
gagtgcaggggctgccgtaataaaacacagatttctttagtgcgaatgccatatgcctgt
aaacttctctttcaagagctgatgtccatgagtattgcacctcgtatgatgagtgtttag
DBGET
integrated database retrieval system
