Pelodiscus sinensis (Chinese soft-shelled turtle): 102445225
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Entry
102445225 CDS
T02980
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04510
Focal adhesion
pss04512
ECM-receptor interaction
pss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102445225 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102445225 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102445225 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pss04147
]
102445225 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
pss00536
]
102445225 (COL4A3)
Exosome [BR:
pss04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102445225 (COL4A3)
Glycosaminoglycan binding proteins [BR:
pss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102445225 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102445225
NCBI-ProteinID:
XP_025038786
Ensembl:
ENSPSIG00000007673
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MQIKLDVLSSGEANFKNKNCVCKGKSHCYCDGMKGNKGEKGFPGIQGPPGQIGFRGPEGP
LGPQGLKGSTGLPGLVGQKGERGLPGLPGFSGLPGLPGEQGYIGPSGRPGIPGCNGTKGD
QGFPGPPGPVGAPGIPGIDGVKGDKGYPATGYDPGFNGKGDPGLPGIPGCKGEPGPRGLP
GLVGPQGPPGSSGISGRMGIPGPKGVMGTKNIGTKGIQGDPGLAGPPGPPGTVIVTLSAP
DNMTDLKGEKGERGSRGPAGPFGSLGLPGDSQSEKGDPGETGPQGKPGKDGIPGPPGFLG
EKGQCGYQGLPGIVGAKGRKGDIGPPGFPGPTKYYDEVAGEKGDEGYPGPPGLKGQPGLP
GPRGSPGVTGRPGLSRFGVNGPEGYPGRKGIKGERGQPGMNTVGSPGLPGLPGSPGSIGL
PGHPGQPGKVTFETHPPGVPGNPGCVGPPGLPGDSGIKGEEASPCHQCSFMPGGPGLPGA
PGPEGQKGATGGQGASGPKGLRGSPGAQGPSGPQGLPGIPGDQGMKGPKGDPGYVYSEGQ
KGNRGDPGIRGNPGRKGSDGLHKNHGSKGSKGIKGERGLDGLKGDRGSLGLPGNQGPPGE
MGLTGPPGYGLQGMTGPKGPKGISGLPGLPGAVGPQGEMSALNSIPGLPGPRGPEGLSGP
PGAMGNVGSRGHCGDLGLPGPEGDPGFPETGFPGNPGPKGDKGLQGSKGSPSLPGKAGKP
GSPGQPGYPGEKGDPGLIIPGQQGGLGSPGGDGFPGVKGDRGFPGFPGLPGCPGLNGADG
PKGEPGSPGARGEKGFPGKFGDCLIGPQGLPGACGVIGQQGEGGTPGSKGDSGIPGLAVQ
GFPGEFGLPGLPGSQGDVGLPGHKGQHGRPGIPGVPGQRGDRGIMGYLGIPGPPGVFGNP
GIPGNRGSPGLPGLKGRKGSLGAKGEPGDKGLPGPLETARDIGDKGEPGSKGCPGKIGLK
GERGNKGIQGSAGPDGTSGISGLPGPKGLPGPPGNRGGMGVPGSKGERGSQGLPGPSGAQ
GPPGLIGSPGDKGEPANSASGPSGNPGPKGDPGPPGEMGRKGERGSPGQPGRVGEPGLPG
NRGDCGEPGIPGPSECAGDPGAKGRKGVPGWKGTRGLPGAMGSPGANGSAGERGNQGRDG
IPGSLGEKGERGAPGWQIPGPQGISGPKGIKGDMGIPGCPGPEGIKGLMGDPGPIGPPGL
NGKPGFPGTPGIMIPGQKGNRGLAGVAGKRGNPGSPGSYGTPVYSIKGNKGVRGVDGIPG
PPGLVGNIGARGSTGVDGTPGNIGPRGETGFPGFQGVTGEKGNRGPPGPMGAAGPIGPKG
PPGHPGSPGKVTCVPGNQGPAGPPGRPGPPGHLGPQGPPGLHGPLGIKGLPGYCGNPGIP
GPIGPKGDKGFQGQRGSPGLIGFPGVRGLPGSPGISIPGPTRRGFLFARHSQSTKIPSCP
FGTAEIYSGYSLLSVQGNEQAHGQDLGTIGSCLQRFTTMPFLFCNTNDVCSFASRNGYSY
WLSTAALMPEDMAPISGSALQPYISRCIVCEGPAMTIAVHSQTTAVPLCPQGWMSLWKGF
SFIMYTSAGSEASGQALASPGSCLEEFRPIPFIECHGRGTCNYYTNSYSFWLASLDPRRM
FREPLPQSLKAGELENIISRCQVCMKRPD
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgcaaataaagcttgatgttttgtcttctggagaggcaaacttcaaaaataagaactgt
gtctgcaagggtaaaagtcactgctactgtgatggaatgaaaggtaataagggtgaaaaa
gggttccctggtattcaaggtccacctggccagataggtttccgtggccctgagggacct
ctaggacctcagggactcaagggttctacagggctaccaggtttagttggccaaaaaggt
gaaaggggattgccaggattacctggtttttcaggtctcccaggtcttccaggtgagcaa
ggatatattggtccatctggacgtccaggtattccaggatgcaatggcacaaagggtgac
caaggatttccagggcctccagggccagtaggtgctccaggaataccaggtattgatggt
gtcaaaggtgataagggataccctgcaactggatatgacccaggatttaatggaaaaggt
gaccctggattaccaggaatacctggatgcaagggtgaaccaggtcctcggggactccca
gggctagttggaccacaaggccctccgggatcttcaggtatttcagggagaatgggcatt
ccaggacctaagggtgtcatggggactaagaatattggaaccaaaggaatacagggtgat
cctggattagcaggacccccggggccaccaggaacagttattgtgacattaagtgcaccc
gataatatgacggacttgaaaggagagaaaggagagagaggatcaaggggtcccgcagga
ccatttgggtcattgggtttgcctggagattctcaaagtgaaaaaggcgacccaggagag
actggtccacagggtaaacctggaaaagatggtatccctggtccacctggttttctggga
gagaaggggcaatgtggttaccaaggattgcctggcatagtaggtgctaaggggaggaaa
ggagacattggcccgccaggatttcctggtcccacaaaatattacgatgaggtggctggt
gaaaaaggagatgaaggatatccaggacccccaggacttaaaggccaacctggcttacct
gggccaagaggttccccaggagtgacaggaagaccaggtttatcaagatttggtgtaaat
ggtccagagggatatccaggacggaaaggaattaagggagagagaggacaacctggaatg
aatactgtgggatctccaggacttcctgggcttccaggcagtcctggctctataggatta
ccaggtcatcctggacaaccaggtaaagtaacatttgaaacacacccaccaggagttcca
ggaaaccccggatgtgtgggacctccaggacttccaggagatagtggaataaaaggtgaa
gaagcaagtccttgtcatcaatgcagttttatgccaggaggacctggacttcccggtgct
ccagggccagaaggccaaaaaggagctactggtggacaaggagcaagtggtcccaaagga
ttgcgaggttctccaggggcacaagggccttcaggtcctcaaggacttccaggaatacca
ggagatcaaggcatgaaagggccaaaaggtgacccaggatatgtgtattcagaagggcaa
aaaggaaacagaggagatccaggaatcagaggaaatccaggacggaaaggttcagatgga
ttgcacaaaaatcatggttcaaaaggctcaaaaggaattaaaggcgaacggggactggat
ggtttgaaaggggacagaggatcactaggactgcctggtaatcaaggtcctcctggagaa
atggggctcactggaccaccaggatacggactacagggaatgacaggtcccaaaggcccc
aagggaatatctggtttgcctggattgcctggagcagttggtccacaaggagaaatgagt
gcattaaattcaatacctggactaccaggacctcgggggccagaagggttatcaggacct
ccaggagcaatgggtaatgttggatcaagaggacactgtggtgatttgggattacctggt
cctgaaggtgatccaggatttccagagactggatttcctggaaatcctggtccaaaagga
gataaaggtcttcaaggatcaaaaggatcaccaagtttgccaggaaaggcaggaaaaccg
ggatccccaggacagcctggataccctggtgaaaagggagaccctggattaattattcct
ggccagcagggtggattaggttccccaggaggagatggctttccaggggtaaaaggtgac
agaggatttccaggatttccaggtttaccaggatgcccaggacttaacggtgctgatggg
ccaaaaggagaacctggctcacccggagcccgtggagaaaaaggatttccaggaaagttt
ggtgattgtcttattggcccacaaggactcccaggtgcatgtggagtaataggccaacaa
ggagaaggaggtacaccaggatcaaaaggagactctggtattccaggcttggctgtccaa
ggattccctggagaatttgggctgcctggattaccaggtagccaaggagatgtgggattg
cctggtcacaagggccagcatggcagaccaggaataccaggtgtaccaggtcaaagagga
gatcgaggtataatgggctatttaggaattcctggacctcctggtgtctttgggaatcca
ggtattccaggaaacagaggttctcctggccttccaggactgaaaggaagaaagggctct
ttaggggcaaaaggtgagccaggtgataaaggacttcctggaccattggagactgcaagg
gatattggagataaaggagaaccaggatcaaaaggatgtccaggaaaaataggtctgaaa
ggagaaagaggaaataaaggcatacaaggatcagctgggcctgatgggacatcaggaata
tcaggtctaccaggtccaaaaggattaccaggacctccaggaaacagaggtggtatggga
gtgccaggttctaaaggggagagaggatctcaaggtttgcccggcccatccggtgcacaa
ggccctcctggccttattggttctccaggtgataaaggagaaccagctaattcagcatct
gggccttcaggaaacccaggaccaaagggtgatccaggccccccaggagaaatgggaaga
aaaggagagagagggtcaccaggtcagccaggacgtgttggggaacctggactacctgga
aatagaggggattgtggagaaccaggaattccaggaccatctgaatgtgctggagatcct
ggtgctaaaggacgcaaaggggtgccaggatggaaaggcacaagaggccttccaggtgca
atgggatcccctggagccaatggatctgctggagaaagggggaatcaaggacgggatggt
attcctggctccctaggggaaaagggagaacgaggtgcaccaggatggcagattccaggt
ccacaaggtatttctggtcctaaaggaatcaaaggtgatatggggattcctggttgtcca
ggaccagaaggtattaaaggtctaatgggggatccaggaccaattggacctcctggattg
aatggaaagccaggattcccaggtacgccgggcataatgattcctggccagaaaggaaat
agaggtcttgccggagtggctggaaagcgaggtaatcctggtagtccaggatcttatgga
acccctgtctacagcataaaagggaacaaaggtgttagaggtgtagatggcataccagga
ccaccgggattggttggcaatattggtgcccgaggttcaacgggagttgatggcacccca
ggaaacattggtcctagaggtgaaactggctttccaggatttcagggagtaacaggagaa
aagggtaatcgaggaccccctggaccaatgggtgcagcaggaccaatcggaccaaagggc
ccccctggtcatcctggatcacctgggaaagtaacatgtgtcccaggaaaccaaggacct
gcaggaccaccaggaagaccaggaccaccaggacatctaggacctcaagggccaccaggg
ttacatgggcctctaggtataaaaggtctaccaggctattgtggaaatccaggaatacct
ggaccaattggtccaaaaggagacaaaggatttcaaggacaaagaggctctcctggactt
attggctttccaggagtacggggcctacctggttccccaggtatttccattcctggtcca
acaagaagaggcttcctttttgcaaggcacagccagtcaacaaagattccttcatgtcca
tttgggacagccgagatctacagtggttattctcttctctctgtacaaggaaatgagcaa
gcacatggccaagatcttgggacaattggtagctgcctacagcgatttaccacgatgcca
tttttattctgtaataccaatgatgtttgcagttttgcttctcgcaatggctattcatac
tggctatcaactgcagcactaatgccagaagacatggccccaatctctggcagtgcctta
cagccctatattagcagatgtattgtttgtgaagggccagcaatgacaatagcagttcac
agccaaacaacggcagttcctttatgtcctcaaggctggatgtctctctggaagggtttt
tccttcattatgtatacaagtgccggctcagaggcctctggccaagcattggcatcacca
ggatcctgcttggaagaattccgtcccattccattcatagaatgtcatggcagagggaca
tgtaactactacacaaattcctacagcttctggctggcttcactagatccaagaagaatg
ttcagggagcctttaccacagagtttgaaagcaggggaactggaaaatatcatcagccgc
tgtcaggtctgcatgaagagaccagactga
DBGET
integrated database retrieval system
