Pelodiscus sinensis (Chinese soft-shelled turtle): 102445371
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Entry
102445371 CDS
T02980
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03013
Nucleocytoplasmic transport
pss03015
mRNA surveillance pathway
pss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102445371 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
102445371 (EIF4A3)
03015 mRNA surveillance pathway
102445371 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102445371 (EIF4A3)
03041 Spliceosome [BR:
pss03041
]
102445371 (EIF4A3)
03009 Ribosome biogenesis [BR:
pss03009
]
102445371 (EIF4A3)
03012 Translation factors [BR:
pss03012
]
102445371 (EIF4A3)
Enzymes [BR:
pss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102445371 (EIF4A3)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102445371 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
102445371 (EIF4A3)
Spliceosome [BR:
pss03041
]
Complex C
Other components
EJC/TREX
102445371 (EIF4A3)
Ribosome biogenesis [BR:
pss03009
]
Eukaryotic type
90S particles
Helicases
102445371 (EIF4A3)
Translation factors [BR:
pss03012
]
Eukaryotic type
Initiation factors
eIF-4
102445371 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
AAA_30
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
102445371
NCBI-ProteinID:
XP_006112698
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
SVYWKKPLKGVCTQNILGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCISVLQC
LDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHV
VAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA
TLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ
AVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWAR
GLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQ
IDEMPMNVADLI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
tctgtatactggaagaaacctttaaagggtgtttgtactcaaaacattctaggatttgag
aaaccctccgccattcagcagagagcaatcaaacagataatcaagggaagagatgtgatt
gcacagtcacaatctggaacaggcaaaacagcaacattttgtatctctgttctacagtgt
ttggacatccaggtccgtgaaactcaggcattgattttggcaccaaccagggagttggca
gtacagattcaaaagggtcttcttgctcttggtgactacatgaatgtgcagtgccatgct
tgtatcggaggcacaaatgttggtgaagatatccggaagttggattatgggcagcacgtt
gttgctggtacaccaggccgtgtttttgatatgattcggcggcgaagtttaaggactcgt
gccatcaaaatgctggttttggatgaagctgatgagatgcttaataagggttttaaagag
cagatttatgatgtgtacagatacctgcccccagctactcaggtggttctgatcagtgcc
accttgcctcacgaaatcctggagatgaccaacaaattcatgactgacccaatccgcatc
ttggttaaacgtgatgaattgactctggaaggaatcaagcagttttttgtggctgtggaa
agggaagaatggaagtttgatacattgtgtgacctgtacgacacactcacgatcacacag
gcggtcatcttctgtaacaccaagaggaaggtagactggctgactgagaagatgagagaa
gctaacttcacggtttcatcaatgcacggtgatatgccacagaaggagagagaatccatc
atgaaagagttccgatccggggcaagtcgtgtgcttatatcgacagatgtctgggccagg
ggcttggatgttcctcaggtgtctctgatcatcaattacgacttgcccaacaacagagaa
ctgtatatacacagaattggtagatccggtcggtatggccgaaaaggtgttgccatcaat
ttcgtaaagaacgatgacatccgtatcctgcgcgatattgaacaatactactctacccag
attgacgagatgcccatgaatgttgctgatctcatttga
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integrated database retrieval system
