Pelodiscus sinensis (Chinese soft-shelled turtle): 102445383
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Entry
102445383 CDS
T02980
Symbol
ITGB4
Name
(RefSeq) integrin beta-4 isoform X4
KO
K06525
integrin beta 4
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04382
Cornified envelope formation
pss04510
Focal adhesion
pss04512
ECM-receptor interaction
pss04518
Integrin signaling
pss04810
Regulation of actin cytoskeleton
pss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102445383 (ITGB4)
04518 Integrin signaling
102445383 (ITGB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102445383 (ITGB4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102445383 (ITGB4)
04810 Regulation of actin cytoskeleton
102445383 (ITGB4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102445383 (ITGB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pss04147
]
102445383 (ITGB4)
04515 Cell adhesion molecules [BR:
pss04515
]
102445383 (ITGB4)
04090 CD molecules [BR:
pss04090
]
102445383 (ITGB4)
Exosome [BR:
pss04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
102445383 (ITGB4)
Exosomal proteins of bladder cancer cells
102445383 (ITGB4)
Cell adhesion molecules [BR:
pss04515
]
Integrins
Integrin beta subunits
102445383 (ITGB4)
CD molecules [BR:
pss04090
]
Proteins
102445383 (ITGB4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
EGF_integrin
I-EGF_1
FN3_DSCAM-DSCAML_C
PSI_integrin
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
Fn3_PBP1
EGF_2
SEA
MukF_M
CRLF2-like_D2
Motif
Other DBs
NCBI-GeneID:
102445383
NCBI-ProteinID:
XP_075759769
Ensembl:
ENSPSIG00000005403
LinkDB
All DBs
Position
20:complement(11397988..11464661)
Genome browser
AA seq
1875 aa
AA seq
DB search
MRRKRMDVLLQRVWARLLLLVVACDVCLCQKSKINSCVASRARSCTACIRVDKTCSYCTD
EIFKESRCDLRENLMSYGCSEANIMSVRGEMQVQQNFSIDTSLKKTQVAPQRMSMRLRAG
EEVSFDMDVFQPLESPVDLYILMDFSYSMSDDLSNLKKMGQNLAEFLQSLTSNYTIGFGK
FVDKVSSPQTDMRPAKLQEPWREADPPFSFKNVIRLTSNINHFSQELMKERISGNLDAPE
GGFDAILQAAVCKENIGWRTDSTHLLVFSTESAFHYEADGTNVLSGILPRNDEACHLNQA
GTYTYDTWQDYPSVPTLVRLLSRHNIIPIFAVTNHSYSYYEKLHKYFPISEIGVLQEDSS
NILELIRVAFERIRSKLDIRADLIPKSMKTDFTSLKYEKTESGSFQVTRGEVGRFQVHVK
AQEYVGGEHVCNLPEEDQQGEIHVKPSSLSDSLKIEASVICDICPCEQQKMVRSSQCSFN
GDFVCGQCTCYPGWRGDMCDCSTASSSDNQACIRPGDSEPCSGRGECLCGKCQCYSEDLT
QRYDGDYCEYDSFQCRRTSGFLCNDRGRCYMGQCACESGWGGEGCECPTSNDTCIDSKGG
ICNGRGRCECGRCICDKPSPYMDPTCEIIQSLFFLGMCEDVRSCVQCQAWGTGEKKGQKC
KDCPYKIQMVDELQKAKEVSEHCSFQDEEDDCTYHYTLEGEPSTMRNNTILVQKKKECPP
GGFLWLIPLLIFLMLLLGLLLLLCWKYCACCKACLALLPCCARGRTVGFKEDHYMLRQSL
MALDHLDTPMVRSGSLKGRDTVRWKINNNVHKPGFSAHAATNPKELIPYGVSLRLARLFT
QNLMKPDSRECEQLRKEVEENLNDVYKHIPGAHSLQQTKFRLQPNAGKRQDHTIVDTVLT
APLSAKLDIVKATEKHVSQEAFNELKVTPGYYTVTSDQDARGMVEFQEGVEFVDVRVPLF
IRDEDDDEKQLQVEAIDVPMGTAKIGRRLVNITIIKEQASSIITFLQPAYSQSRFDQVAR
IPVFREILESAKSQVTYRTRDLTAKEGKDYVFTEGDLVFQPGETRKEVQVPLLELTEIDA
LLQNRQLKQFSMDLLNPKYGTKIGKYPQTTVTITDPEVVDGMPIPIGLAQLSQSPRGKLG
APLNPNAQALSSRKIRFNWLPPPGKPSGYKVKYWIQGDPESEAKLIESTVPSAELNNLYP
YCDYEMQVCTYSSMGEGPYSDVIHCRTLQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNG
EITAYEVSYGLVNEDNIPIGPVKKVMVEEPKKRMVLIENLRESQPYQYTVKARNGAGWGP
ARDAIINLATQPRRPMSIPIIPDIPIIDAEGGEDYDSYLMYSADVLRSPTGSKHPSVSDD
SGSKWKYVQLLGEDLDLRRITWRLPAEMIPRLSGSSCFSSDTEGLLREDSSLSELLDTDT
ASGSLTRSRTPQPQPEHLLNGRMDFTFPGSGGSLSRTLHTSYNQLSSHMHQDRRLMGSSS
LTRDYSTMGSGYDQPGRILPPLREDAGRVALLPQDVGVRSRAQAKGSYASNGFRDSIIMP
DGLTGISKYIDYRMPLGVPDTPTRLVFSALGPTSLKVSWQEPQCEKEVQGYNVQYQLLSG
GDMYSLSIPNPAQNSVVVDNLLPNHSYIFRVKAQSEEGWGPEREGVITIESQVDPQSPLN
PVPGSPFTLSTPSAPGPLVFTALSPDSLQLSWERPRKPNGAILGYMVTCEMLHGGGEART
IYVEGDSPETTLTVPHLSENIPYKFKVQAKTTQGFGPEREGIITIESQDAGAFSQFGGQQ
YMREEVYNLPMEYSTNTTISHSSLDPYYTDGMLMTTQRVESGGTLTKQVTKEFVSRTMMS
SGTLTNQMERQFFEA
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggaagaggatggacgtgctgctccaaagggtgtgggccaggctgctcctgttg
gtcgttgcctgtgatgtatgcctgtgccaaaagagcaaaattaacagctgcgtggcctcc
agggcgagaagctgcacggcgtgtatccgagtggacaagacctgctcctactgcacagat
gagatcttcaaagaatcccgatgtgacctgagagagaacctgatgagctatggctgcagt
gaggccaacatcatgtccgtgagaggggaaatgcaggtgcagcagaattttagcattgac
acatctctgaagaaaacccaggtggccccgcagcggatgtccatgcggctgagggcaggt
gaagaggtcagcttcgacatggacgtcttccagccccttgagagccccgtagatctctac
attctcatggacttctcctactccatgtcagatgacttgagcaacctcaaaaagatgggg
cagaatctagcggaattcctgcaatccctgacctccaattacaccatcggatttggcaag
tttgtggacaaagtctcctctccacaaacagacatgagacctgctaagctgcaagaaccc
tggagggaggccgacccgcccttctccttcaagaacgtcatccgcctgaccagcaacatc
aatcatttcagccaggaactgatgaaagagcgcatctctggcaacctggacgccccggag
ggggggtttgatgccatcctgcaggcagccgtttgcaaggagaacattggctggaggact
gacagcactcacttgctggtcttctccaccgagtccgccttccactacgaagccgatggc
accaatgtcctgtcggggattctgccgaggaatgacgaggcgtgtcatctgaaccaagcg
ggcacctacacctatgacacctggcaggactacccctctgtgcccaccctggtgcgcctg
ttgagccggcacaacatcatcccgatcttcgccgtcactaaccactcctacagctactat
gagaagctgcacaagtatttccccatctctgaaattggggtgctgcaggaagactcctcc
aatatcttggagctgattcgtgtggcctttgagcgtatccgttccaagctggacatccgg
gcggacttaatccctaagtccatgaagacagactttacctccttgaaatatgaaaagaca
gagtctggctcgttccaagtcacccgaggggaagtgggccgcttccaggtgcatgtgaaa
gctcaggaatatgtgggcggggagcacgtctgcaacctccccgaggaagaccagcagggg
gaaatccatgtgaaaccctcctctttgagtgacagcctgaaaattgaggcctctgtcatc
tgcgacatctgcccctgcgaacagcaaaagatggttcgatcgtcccagtgcagtttcaat
ggggactttgtctgtgggcagtgcacctgctacccaggctggcgaggggacatgtgtgac
tgctccacagcctcttccagcgacaaccaggcctgcatccggcctggcgactcggagccc
tgctcggggcggggcgagtgcctctgtgggaaatgccagtgctattccgaggacctgacc
caacgctatgacggcgactactgcgagtacgacagcttccagtgccggcgcacctccggc
ttcctctgcaatgaccgcggtcgctgctacatgggccagtgtgcctgtgaaagcggctgg
gggggcgaaggctgtgaatgtcccaccagcaatgacacctgcatcgacagcaaagggggg
atctgcaatggccgtgggagatgcgagtgtggccggtgcatctgtgacaagccttctcca
tacatggatcccacctgtgaaatcatccagtccttgttcttcctggggatgtgcgaggat
gttcgaagctgtgtccagtgccaggcctgggggaccggggagaagaaggggcagaaatgc
aaggactgcccttacaagatccagatggtggacgaactgcaaaaagcgaaggaggtgagc
gagcactgctcgttccaggatgaggaggatgactgcacgtaccactataccctggaaggg
gagcccagcacgatgcgcaacaacaccatcctggtgcagaagaagaaagagtgcccaccg
ggaggcttcctgtggctcatccccctgctcattttcctgatgttgctgctggggttgctg
ctgctgctctgctggaagtactgtgcctgttgcaaggcttgcctggccctgctgccctgc
tgtgcacgaggccgcaccgtcgggttcaaagaggatcactacatgctgcggcagagcctc
atggctttggaccacctggacacccccatggtgcgcagcggctctctgaagggcagagac
accgtccgctggaagatcaacaacaacgtccacaagccgggcttctccgcccacgccgcc
acgaaccccaaggagctgattccttatggcgtctcgctgagactggcccggcttttcact
cagaacctcatgaagccagacagccgcgaatgtgagcagctgcgcaaggaggtggaggag
aacctgaacgatgtctacaagcacatccctggtgcccacagtctccagcagaccaagttc
aggctgcagcccaacgctggaaaaaggcaggaccacacgattgtggacacggtgctcacc
gctcccctttcggccaagctggacattgtgaaagcgacagagaaacacgtctctcaggag
gctttcaatgagctgaaggtgacaccgggttactataccgtgacttctgaccaagatgcc
cgtgggatggtggagttccaggaaggagtggaattcgtggacgtccgggtcccactcttc
atcagggatgaagacgatgatgaaaagcaactgcaagtggaggccattgatgtccccatg
ggaactgcgaagattggacgcaggctcgtcaatatcaccatcatcaaagagcaagccagc
agcatcatcaccttcctgcagcccgcctattctcagagccgctttgaccaggtggccaga
atcccggtgtttcgggagatcttggaaagcgccaagtcccaggtcacttacagaactcgg
gatctcaccgccaaggagggcaaggactacgtcttcacagagggcgacttggtcttccag
cctggggagacgcggaaggaggtgcaggtgccactgctggagctgactgagatagacgcc
cttctgcaaaaccgccagctcaaacagttttccatggatctgctcaaccccaagtacggc
accaagatcggcaaatacccacagaccacggtgaccatcaccgacccagaggttgtggat
ggcatgccaatccccattggcttggcccagctctctcagtctcccagaggcaagctgggt
gccccgctcaacccgaacgcccaagctctgagctccaggaaaatccgcttcaactggtta
ccgccccccggcaaaccctcagggtacaaggtgaagtactggatccaaggagaccccgag
tcggaggccaagctaatcgagtccacagtgccctcggcagagctgaataacctgtacccc
tactgcgactatgagatgcaggtctgcacctacagcagcatgggcgaggggccctactct
gacgtcatccactgccgcaccctgcaggaagttcctagtgaacctgggcgtctggctttc
aacgtcgtctcttccactgtgacgcagctgagctgggctgagccggctgagaccaacggg
gagatcacagcctatgaagtcagctacggactggtcaacgaggacaatattcccattggg
cctgtgaagaaggtgatggttgaggagccgaagaagcgcatggtcctgattgaaaacctg
cgggagtcacagccgtaccaatacaccgtgaaagccaggaacggagccggctgggggcct
gcgcgagacgcaattatcaaccttgccacgcagcccaggcgtccaatgtccattcccatc
atccccgacatcccgatcattgatgccgagggcggggaagactacgacagctacctgatg
tacagcgcagacgtgctgcgctccccgaccggcagcaagcatcccagcgtctccgatgat
tccggctccaagtggaaatatgtgcagctgctgggggaggacttggaccttcgccgcatc
acctggaggctcccagccgaaatgatcccccgcctctctggcagtagctgcttctcctca
gacaccgagggcctcctccgtgaggatagctccctctctgagctgttggacaccgacacg
gccagcggcagcctgacgaggagcaggacgccccagccccaaccagagcatctgctgaat
ggccggatggatttcaccttccccggcagcgggggctccctgagcaggaccttgcacacc
agctacaaccagctgtcctcgcacatgcaccaggacaggaggctgatgggaagctcgtct
ctgaccagagattacagcacaatgggctcaggatatgaccagccagggaggattctccct
cccctccgtgaagatgctggcagggtggctctgctgccccaagacgtaggtgtgaggagc
agggcacaggcgaagggttcctatgccagcaatggctttcgggattctataatcatgcct
gatgggctcactgggatttccaagtacatagattacagaatgcccctcggcgtccccgac
acgcccacccgcctggtgttctccgcgctggggcccacctccctgaaagtcagctggcag
gagccgcagtgcgagaaggaggtgcagggatacaacgtgcagtaccagctcctcagtgga
ggagacatgtacagcctgagcatccccaacccagctcagaactcggtggtggtggacaac
ctgctgcccaaccactcctacatattcagggtgaaggcccaaagcgaggaaggctggggg
cccgagagagaaggtgtcatcaccattgagtcccaggtggatccgcagagcccgctgaat
cccgtaccaggttccccatttacactgagcacccccagcgcgccgggacccctggtgttc
acagccttgagcccggactcgcttcagctcagctgggagagaccccgcaagcccaatggg
gcaattctgggctacatggtcacctgcgagatgctacacggaggaggagaagccaggact
atctacgtggagggggacagcccagaaaccaccttgacagtgccccacctgagcgagaac
atcccctacaagttcaaagtgcaggccaagaccacccaagggtttgggccagagagagaa
ggcatcatcaccattgagtctcaagatgcaggagctttctcacagttcggaggacagcaa
tatatgagagaggaagtgtacaacctccccatggagtacagcaccaacaccaccatcagc
cactcctctctggatccctactacaccgatggcatgttgatgaccacgcagcgagtggag
agcggtggcaccctcaccaagcaggtgaccaaagagttcgtcagcaggaccatgatgtcc
agcggaaccctcaccaaccagatggagagacagttcttcgaagcctga
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integrated database retrieval system
