Pelodiscus sinensis (Chinese soft-shelled turtle): 102445655
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Entry
102445655 CDS
T02980
Symbol
CHD9
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pss03036
]
102445655 (CHD9)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102445655 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
102445655
NCBI-ProteinID:
XP_014428045
LinkDB
All DBs
Position
Unknown
AA seq
2886 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDTQ
TQQKMSEFEQLNQYDSLKLQVNQSFNSPADSVLSPHTQYNCSPIHPQNQSNGMFPDVADG
SPMWGHQTTTTISNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEQQHQRASLQSQQS
RNNINTGQDSLSQPKNFLEVTVSAPHRVSVTHPPQITNPSASQQPLSVQQFSHNASASIH
FCGNQEGNFDGQSPIMTPCSVNSTQQFSSPYSYSNNHISPTSLLQSSTALSTSQQTHPLS
DYTGSDAFTSQTGNKQETTEHLLNSNTTLNSNNFQMLHSAHPQGSFSSSKLSPMNINFPA
SASSASQISHFSDPIESNGFSSLDENLLHQVESQAEPFTGLDPEDLLQEDLLPQFDDSAF
VQDTSSHMLEHDLEHHITQSSEIAPTQSQSQMHLWHSSVSNRHLQDRNRMALEGQPPSSK
KTDVSGTYTKLQNTQVRGMSEKKQKKKVESESKQEKANRIISEAIAKAKERGERNIPRVM
SPENFPSVSAEGKEEKKGRKIKSKPKDKESKKPKTGSSSKIKDKTKIGKLIITLGKKQKR
KNESSDEMSDTKLTTQRSFKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSVKIKXX
XXPLQKFVENPSEEDAAIVDKILSSRIVKKEISAGMTMEEEEFFVKYKNYSYLHCEWATE
QQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEELFNPDYVEVDRVLEVSFCEDKDTGEPV
IYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLHASRPDSRRLDRPPPNSWKKIEQSRE
YKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLI
IAPLSTITNWEREFRTWTDLNVVVYHGSMVSRQMIQQYEMYFRDSQGRIIRGTYRFQAII
TTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTV
EELFFGDLKTEEQVLHIHFLTFYLQNTNLSDXGDLKTEEQVQKLQAILKPMMLRRLKEDV
EKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNH
PYLIKGAEEKILGEFRETYIPTAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQ
MVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGIN
LTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGL
DKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRR
TKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVID
TPRIRKQTRPFSATKDELAELSEAESEGDDKPKLRRPCDRSSGYGRTECFRVEKNLLVYG
WGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTR
ELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHCNK
VLLRVRMLYYLKQEVIGNECQKVFDGVDSSDVDVWVPEPEHSEVPAEWWDAEADKSLLIG
VFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPAMFKD
DMEDDASSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQIQP
TFPVQATVMQPPYEEAALNPKIAAKIERQQRWTRREEADFYRVVSTFGVVFDPEGGRFDW
TKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELADPSIFIQPITEERASRTLY
RIELLRKVREQALRHPQLFERLKLCQPNPDLPIWWECGTHDRDLLIGAAKHGVSRTDYHI
LRDPELSFMSSQRNYSQNKVALSRTSTPLLHQYQMALSASPLAPQSRLPDTKGNALEDTK
VKSENLKEDPQSSEEESMSTEETQTMMKSEPLSPKNGMPSQTADPKPGVKTETDRRMVAA
RTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSGSSS
SSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDDEEARKREGTTHIKAYDEESVASLST
TLDETQDCFQLNNGTPNSNYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSARR
SYDSNTVASFYTTKLLDSPGAAADYSEPSAPTPPSVGVKEEHDQSPQMPKVKKHVREKEF
TVKINDESGLKLTFQKQGFSQKRLFESEEGMLGQQQYLARLRELQNGSETSLVNFPKSLP
ESGASNQLTASANGVIIDSQPVVKKRRGRRKNVEGVDILFTNRNKPPNHVNPGIKSLQVA
PVINPTLTYAQSQGVLDAESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYVEDLGA
FIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKDLCR
FLKENPEYGVAPEWGDVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIAKATAAA
AAATAANVSVNPLLANGLLPGVDLPTLQALQQNLQSLQSLQVTAGLMGMPAGLTTGGEAK
NVAAMFPMLLSGMAGLPNLLGMGGLLTKSTESVSEETKGNDSKDPDVKKERTENQHADNG
GEDSVSSSPSTSSAAANPLALNPLLLSNILYPGMLLTPGLNLHIPAVSQSNIFDVQKTEN
NDTGSTKPTEEKEENSRVRDQEDKGGTEPSSHNENSTDEGSEKADVSSGSDSTSSSSEDS
DSSEED
NT seq
8661 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaacctttttagcgagacgttggaa
ggtttgtcggatgatgcctttgtacaaccaggaccggtttcgcttgttgatgaattaaac
ttaggtgcagaatttgagcctttgcacatagactcattgaatcatgtgcaagatactcaa
acacagcaaaagatgagtgaatttgagcagttaaatcagtatgattcactgaaacttcaa
gtaaatcagtctttcaacagtccagctgacagtgttttgtcaccacacactcaatataat
tgctcaccaatccatccacaaaaccagtccaatggaatgtttcctgacgtggctgatggt
agtcctatgtggggtcatcaaactaccacaactatttcgaatcaaaatgggtctcctttt
caccaaggacattctcagtctatgcagcaaaataaaagttttgtagcacaccatgacttt
gccttatttcaggccaatgaacagcagcatcaacgtgcctctctacagtcgcaacaaagc
agaaacaatatcaacacagggcaagactctctgagtcagccaaaaaactttctggaggtt
actgtatctgctccacacagagttagtgttacccatccacctcaaattactaatccatca
gcttcacagcagcctctctctgttcaacagttttctcacaatgccagtgcttcaatacat
ttttgtgggaatcaagaaggaaactttgatggacagtctccaattatgactccttgctct
gttaatagtacacagcagttttcttctccatattcttactctaataaccacatttctcct
accagccttctacagtcttctactgctctttctactagtcagcaaacacatcctttgtct
gattatactggaagtgatgcctttacatctcaaacagggaacaagcaagaaaccaccgag
cacctcttgaattctaacacaacattgaattcaaataatttccaaatgttgcattcagca
catcctcagggcagtttcagtagttcaaaactctctcccatgaacattaattttccagcc
tctgctagttctgcttctcagataagccatttcagtgatcctatagaaagcaatggtttt
tcatctttagatgagaatttacttcatcaagttgaatctcaagctgaaccatttacagga
cttgatccagaggaccttcttcaggaagacctactaccccaatttgatgattcagcattt
gttcaggacacttcaagccacatgttagagcatgacctagaacaccatattacacagtcc
tctgagattgctccgactcagtctcaaagtcagatgcacctttggcattcttcagtttct
aatcggcacctacaagacagaaatcgtatggccttggaagggcagcctccctcctccaag
aagactgatgtttcagggacatatactaaactgcagaatacccaggtgagggggatgtct
gaaaagaaacagaagaaaaaagtagaatcggaaagtaagcaggagaaggctaatcgcata
atatcagaggcaattgcaaaagcaaaagagagaggggagagaaacattccaagagtaatg
agccctgaaaacttccccagtgtttcagctgaaggaaaagaggaaaaaaaaggtagaaaa
attaaatcgaaaccaaaggacaaggagagcaaaaaaccgaaaactggttcctcatccaaa
attaaagacaaaacaaaaattggcaagcttataatcacattgggtaaaaagcagaagcga
aagaatgaatcttcagatgaaatgtctgatactaagctgactacacagcgatcatttaaa
gatgaggattctcagaagagaagatcaaatcgtcaagttaaaagaaaaaagtatgctgaa
gaaggagaaggaaaacagtcagaggaagaggctaaagtttcggtgaaaatcaaaannnnn
nnnnnacccttacaaaaatttgtggagaatccaagtgaagaagatgcagcaattgtagat
aaaattttatcctccaggatagtgaagaaagaaatatctgctggaatgacaatggaagaa
gaagaattttttgtaaaatacaagaactactcctatcttcactgtgaatgggccactgaa
cagcagcttctgaaggataaaagaattcagcagaaaattaaacggttcaagctgaggcaa
gcacaaagagcccacttttttgcagatatggaagaagaactttttaatcctgattatgtt
gaagtagaccgggttctagaagtctccttttgtgaagataaggacactggtgagcctgtt
atttactatctagtaaaatggtgttcattgccatacgaagacagcacttgggagttaaaa
gaagacgttgaccaggcaaaaatagaagaatttgaacaattgcacgcatccaggcctgac
tcaaggagattggaccgaccacctcctaactcctggaagaagatagaacagtccagagaa
tataaaaatggcaaccagctcagggaataccaactggaagggctcaactggctccttttc
aactggtacaatagacgaaactgcattttagcggatgaaatgggtcttggcaaaaccatc
cagtcaattacattcctctatgaaatcctcctgactggtatccgagggcctttcctgatc
atagctccactttccactataaccaattgggaaagagaatttcgcacttggactgatctt
aatgtcgtggtgtatcatggaagcatggttagcaggcagatgatacagcagtatgagatg
tacttcagggactctcaggggcgtatcattcgaggtacttaccggttccaagctattatc
accacttttgaaatgattcttggtggctgtccagagctcaatgcaattgaatggcgatgt
gttattattgatgaagcacacagactgaagaataaaaattgcaaactcctggagggactc
aaactcatgaatcttgagcacaaagtgctgttgacaggcacaccactgcagaacacggta
gaagaactgttttttggggaccttaaaacggaagaacaggtactacatatacacttctta
actttctacttgcaaaataccaacttgagtgactaaggggaccttaaaacggaagaacag
gtacaaaagctacaagccatcctgaaaccaatgatgttgagacggttgaaagaagatgta
gagaaaaagttagctcccaaagaagaaactataattgaagtagaactaactaatatccag
aagaaatattatcgggcaattttggaaaagaattttgcattcttgtcaaaaggagcaggc
caagctaatgtacccaatctagttaacactatgatggaacttagaaagtgctgcaatcat
ccttatctcatcaaaggtgctgaagagaaaatccttggggagtttagggaaacgtatatc
ccaactgctcctgatttccatctacaagcaatgatccagtcggctggtaaattagtcctc
attgataaacttcttccaaaaatgaaagcaggaggccataaggtgcttattttctctcaa
atggtgcgctgtcttgacatcctggaggactacctaatacataaaaggtacttatatgag
cgaattgatggcagagtgagaggaaatctgaggcaagctgctattgatcggtttagtaaa
ccagactctgatcggtttgtgtttcttctgtgtaccagagctggtggattgggcattaat
ttgactgcagctgatacatgtataatttttgattctgactggaatcctcagaatgatctc
caggcccaagcccgttgtcacaggattggtcagaacaaagcagtaaaggtctacagattg
ataactcgaaactcttatgaaagagagatgtttgacagagcaagtctgaaactgggtctg
gataaagctgtcctacagagcatgagtggaagagaaaatagtgttggtggtatccaacag
ctttccaaaaaagaaatagaagacctgctaagaagaggtgcgtatggtgcaattatggat
gaagaggatgagggctctaaattctgtgaagaagacatagaccaaatcttgcagcggcgt
acaaaaactatcacaattgaatcagaaggaaggggttcaacgtttgccaaggctagtttt
gttgcatcgggaaataggactgatatttcattagatgatcccaacttctggcagaaatgg
gccaaaaaggcagaaatagatatagatgccatcagtggtagaaacagcctggttattgat
accccaagaattaggaagcaaacaagaccctttagtgccacaaaagatgagctggctgag
ttatcagaagcagagagtgaaggggatgataaaccaaaactccgcaggccttgtgatcgc
tccagtggatatggaagaacagagtgctttcgggtggagaaaaacttattggtctatggg
tggggtcggtggagagaaattttgtcacatggtcgattcaagaggcaactaaatgaacac
gatgtggagataatttgccgagcacttctagcatattgcctagttcactacagaggagat
gaaaagataaaaagttttatatgggatctcatcaccccaacagaagatggccagacacga
gagctacagaatcacctgggtttgtcagctcctgtgcccaggggtagaaaaggaaagaaa
gtaaagactcaagctagcacctttgatatacacaaagcagaatggctccgaaaatataat
ccggaacatctactgcaggatgaaggttataaaaaacacataaagcatcactgcaataag
gtcttgcttcgagtaagaatgctgtattacttgaaacaagaagtcattggtaatgaatgt
caaaaagtgtttgatggagttgattccagtgacgttgatgtttgggtccctgagccagag
cattctgaggtccctgcagaatggtgggatgcagaagcagataaatccctcctaattgga
gtttttaaacatggctatgaaaagtacaacactattagagcagatcccgcactctgtttc
ttggaaagggtgggcaaaccagatgagaaagcagttgctgctgaacagagagcgaatgat
tacattgatggggatgtagaagatccagaatataaaccagccccggcaatgtttaaagat
gatatggaggatgatgcttcatcaccaggggatctagtaatagccgatggagatggtcag
atgatggaaggagacaaaatttattggcctactcagtctgctttaacaacacgtctgcgc
cgcttaataacagcttaccaacgtactagtaagaacaggcaggcccagcaaattcaacca
acatttccagtccaggccactgtgatgcagcctccatatgaagaagctgctctaaatcca
aaaatagctgccaagattgaaaggcaacaaagatggacaagaagagaagaagctgatttt
tacagggttgtatccacttttggagtggtgtttgatcctgaagggggccgatttgactgg
acaaaatttagagccatggcaaggctacataagaaaactgatgaaagtttggagaagtat
ttatatgcatttatgtctatgtgcagaagagtctgtcgccttccctcaaaagaagaactt
gcagatccaagcatttttatccaaccaattacagaggagcgtgcttctcggaccttatat
cgcattgaactcctgaggaaggtgcgagaacaggccctccgacatccacagctttttgaa
cgcttgaaactttgtcagccaaatccagacttgccaatctggtgggaatgtgggactcat
gacagggatttacttattggagctgctaaacatggcgttagcaggacagactatcacatt
cttcgtgatcctgagctctcatttatgtcttcccagaggaactacagtcagaataaagtg
gcattatctaggacttctactccacttttacatcagtatcagatggccttgtctgcttct
cctcttgcacctcagtcaagattgccagatacaaaagggaatgctcttgaggatacaaaa
gttaaaagtgaaaaccttaaagaggatcctcagtcatctgaagaggaatctatgtctact
gaggagacacagacaatgatgaaatctgaacctttgagcccaaagaatggcatgccatcg
cagactgcagaccccaagcctggtgtgaagactgaaactgacaggcgtatggttgcagca
aggacagagcccctaactccgaaccctgcttccaaaaaacagagagtcagcaaaagaggg
tcagactctagctctgattctgactctgattcagacagatcatcctgttcttccaggtca
tcttcctcgtcctcttcttcatcctcttcttgttcacactcacggtcgggatccagttca
tcatcatcatcctcttgttcttcagcatcttcctcctcctcctcctcgtcatcttcatca
tcatcatcgtcgtcgtcatcatctgaagagagtgacagtgatgatgaagaggcacgaaag
cgagaaggaaccactcacatcaaagcatatgatgaagagagcgtagcttctctgagcaca
acactagatgagacccaggactgtttccagttgaacaatggaacgccaaattccaactat
ctcttacaaggtggatacatgttagctgcatcctattggccaaaggatcgagttatgatt
aacagactggacagcatttgtcaaacagtgttgaaaggtaaatggccttcggcaagaaga
agttatgacagcaatacagtagcatctttctacacaaccaaactactggacagcccgggt
gctgctgcagactacagtgaacctagtgcaccaacacccccaagtgtaggcgttaaggaa
gaacatgatcagtcgccacagatgccaaaggtgaagaagcatgtacgagaaaaggagttt
acagtgaaaatcaatgacgaaagtggtttgaaattgacttttcagaagcaggggttttcc
cagaaaaggctatttgaaagtgaagaaggcatgttaggacagcaacagtacctggctcgg
ctacgtgagctccagaatggttcagagaccagccttgtcaattttccaaaatccttacca
gaatcaggtgcttccaatcagttaacagctagtgctaatggagtgataattgacagccag
cctgtagtcaaaaagaggagaggaagaagaaagaatgtagaaggagttgacatcctcttt
acaaatagaaataaaccacctaatcacgttaatccaggcattaaatccttgcaagttgct
ccagtaataaacccaacacttacctatgctcagtcccaaggtgtccttgatgctgaaagc
ccggttcctgtcattaacctgaaagatggaacaagacttgcaggtgatgatgcaccaaaa
aggaaggatttagaaaaatggcttaaggagcatcctggttatgttgaagatttaggagct
tttattcctagaatgcaacttcatgatgggaggcccaaacaaaagaggcaccgttgtcga
aaccctaataaactggatgttaatagtctcactggtgaagagcgtgttcagctgattaat
agaagaaatgcaagaaaggtgggaggtgcttttgctccacctctgaaggacttatgcaga
ttcttgaaagaaaatcctgagtatggagtagctcctgaatggggagatgttgtgaaacaa
tctggatttcttccagaaggtatgtttgatcgtattctcactgggcctgttgtacgagaa
gaagtaagcaggaggggtaggcggcctaaaagtgaaattgccaaggcaaccgctgcagca
gcagctgcaacagcagcaaatgtttctgtcaaccctttgctagccaatggattacttcca
ggagtggatctacctactcttcaggccttacaacaaaacctgcaaagcttgcaatcactg
caggtaacagcaggattaatgggaatgcctgctggactaactactggaggagaagctaag
aatgtggctgccatgttccctatgctgctgtcaggaatggctggattaccaaacttgttg
ggtatgggaggactcctaacaaagtctacagaatctgtttcagaggagacaaagggaaac
gactcaaaagacccagatgtaaagaaagaaaggacagaaaaccaacatgcagataatggt
ggtgaagactctgtatcaagttctccctctacatcctctgctgctgccaaccccttagct
cttaaccccttacttttgtccaatatactttatccagggatgcttctcactccaggcctt
aatcttcatatcccagctgtgtcccagtccaatatttttgatgtacagaaaactgaaaac
aatgacacaggctcaaccaagcctacagaggagaaggaggaaaattctagggttagagat
caggaagacaaagggggaacagagccaagttctcataatgaaaacagcacagatgagggt
tcagagaaagcagatgtttcatctggttctgacagtacatcatcttcatctgaggattca
gattctagtgaggaagactga
DBGET
integrated database retrieval system
