Pelodiscus sinensis (Chinese soft-shelled turtle): 102445739
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Entry
102445739 CDS
T02980
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102445739 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pss03041
]
102445739 (PRPF8)
Spliceosome [BR:
pss03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102445739 (PRPF8)
Complex C
U5 SnRNP specific factors
102445739 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
102445739
NCBI-ProteinID:
XP_006127092
Ensembl:
ENSPSIG00000013393
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGGCAPVPSPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETCEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggctggagtgtttccctaccgcgggggctgtgccccagtgcccagtcccttggctcca
ctgcccgactacatgtctgaagagaagctgcaggagaaagcccgcaaatggcagcagctg
caggcaaagcggtatgctgagaagaggaagtttggttttgtggatgcccagaaggaggac
atgcccccagaacatgtgaggaagattatccgggaccatggtgacatgactaacaggaag
tttcgtcatgacaaacgagtttatttgggagccctgaagtacatgcctcatgctgtcctg
aagctcctggagaacatgccaatgccctgggaacaaatccgagatgttccggtcttgtac
catatcactggtgcgatctcctttgtgaatgagattccgtgggtcatagagccagtctac
atctcccagtgggggtccatgtggatcatgatgagacgagagaagagagacagacgtcac
ttcaaaaggatgaggttccccccgtttgacgatgaggagccccctctcgactatgctgat
aacatcctggatgtggagccccttgaagcaatacaacttgagctggatcctgaggaagat
gcccctgtcctggattggttttatgatcatcagccattgaaagacaacaggaagtatgtg
aatggttctacgtaccagcggtggcagttcacacttcccatgatgtccacgttgtaccga
ctagccaaccagctgctgacagatcttgtagatgacaactacttctacctgtttgatctg
aaggccttctttacttccaaggctctgaacatggcgattcctgggggtcccaagtttgag
cctctggtccgagacattaacctacaggatgaagattggaatgaattcaacgacatcaat
aaaataatcatcaggcagccaatcaggacagagtacaagatagccttcccgtacctctac
aacaatctgccgcaccacgtgcacctcacctggtatcacacgccgaacgtggtcttcata
aaaacagaggatcctgacctgcctgcgttttactttgatcccttgatcaatcccatctct
cacaggcactcggtcaagagtcaggaaccgttgcctgatgatgatgaagagtttgaatta
ccagaatttgtggagcctttcctgaaagacaccccactgtacactgacaacacggccaat
ggcattgcactgctgtgggccccgcgacccttcaacttaagatctggcaggacacgcagg
gctctagacatcccgttggtgaagaactggtaccgagagcactgcccagcagggcagcca
gtgaaggtgagggtctcctaccagaagctgctgaagtactacgtgctgaatgcactcaag
cacaggcctcccaaggctcagaagaagcggtacctattccgctccttcaaggccacaaag
tttttccagtccacaaagctggactgggtggaggtgggcctgcaggtgtgccgccagggt
tacaatatgctcaacttgctgatccacaggaagaacctcaactatctccacctggactac
aacttcaatctcaaaccagtcaagaccctcactaccaaggagagaaagaagtctcgattt
ggtaacgctttccatctctgccgagaggttctgcgtttgaccaaactggtggtggatagc
cacgtccaatacagactgggaaacgtggacgcatttcagttggcagatggcttgcagtat
atctttgcccatgtgggacagctgacagggatgtacaggtacaagtacaaactgatgagg
cagattcgcatgtgcaaggacctgaagcatctcatctactacaggtttaacacagggcct
gtggggaagggacctggctgtggcttctgggccccaggctggcgggtctggctgttcttc
atgagaggcattaccccgctgttggagcggtggctgggcaacctgctagccaggcagttt
gaaggccgacactcaaagggcgttgcaaagaccgtaacaaagcagcgcgtggagtctcac
tttgacctggagctgcgagcggccgtaatgcacgacattctagacatgatgcctgagggg
atcaagcagaacaaagctaggaccatcctgcagcacttgagcgaggcctggcggtgctgg
aaagccaacatcccctggaaggtgcctgggctgccaactcctattgaaaacatgatcctg
agatacgtgaaggcaaaagctgactggtggacaaacacagctcactacaacagagagcgg
atccgccggggagccacggtggacaagacagtgtgcaaaaagaacctgggtcggctgacc
aggctttacctgaaagctgagcaggagaggcagcacaattacttgaaggatggtccctac
attactgcagaggaagctgtcgcggtgtacaccaccaccgtgcactggctggagagcagg
aggttctcacccatccccttccctccactctcctacaagcatgacaccaagctgctcata
ctggccttggaaaggctgaaggaagcctacagtgtgaaatcccgtctgaaccagtcgcag
agagaggagttgggtctcattgagcaggcgtatgataatccccacgaagctctgtccagg
atcaaacgacacctcctgactcagagagcctttaaagaggttggtatagagttcatggac
ctctacagtcacctggttcctgtttatgatgttgagcccctggagaagattacagatgcc
tatctggatcagtacttgtggtatgaggctgacaagcgaagactcttccctccttggatc
aaacctgctgacacagagccgcctccgctgctggtgtacaaatggtgccaaggcattaac
aacctgcaggatgtctgggagacgtgtgagggggagtgcaatgtgatgctggagtcccgc
ttcgagaagatgtatgagaagattgacttgacactgctcaacaggctcttgcgtctcatt
gtcgaccataatattgctgactacatgaccgctaagaacaacgtggtgatcaactacaag
gacatgaaccacaccaactcctatgggattattcgggggttgcagtttgcgtccttcatt
gttcagtactatgggctggtgatggacctgctggtgctgggccttcaccgagccagcgag
atggccggcccaccacaaatgccaaatgacttcctgagcttccaggatattgccacggag
gtggcccatcccatccgcctcttctgcagatacattgaccgtattcacatcttcttcagg
tttacggcagatgaggcaagggacttgatccagcgctacctgacggagcatccggatccc
aacaacgagaacatcgtgggctacaacaacaagaagtgctggccgcgagacgcccggatg
cggctcatgaaacatgatgtgaacctcggccgggcggtgttctgggacattaagaaccgc
ctgcctcgctccgtcaccactgtgcaatgggagaacagctttgtgtctgtgtatagcaag
gacaatcccaacctgctgttcaacatgtgcggctttgagtgccgcatcctgcccaagtgc
cgcaccagctatgaggagttcacccacaaggacggtgtgtggaacctgcagaatgaggtg
accaaggagcgcacggctcagtgctttctgcgtgtggatgacgagtctatgcagaggttt
cacaaccgcgtgaggcagatcctcatggcctccggctccacaaccttcacgaagatcgtg
aacaaatggaacacagccctgattggcctgatgacctatttccgggaggctgtggtgaac
acacaggagctgcttgacctgcttgtgaagtgtgagaacaagattcagacccgaatcaaa
attggcttgaactccaagatgcccagccgcttccccccggtggtgttctacacccccaaa
gagctggggggcttgggcatgctgtccatgggccacgttctgataccccagtctgacctg
aggtggtccaagcagactgatgtcggcatcactcatttccgctcagggatgagtcacgag
gaagaccagctgatcccaaatctgtaccgctacatccagccatgggagagcgagttcatt
gactcgcagagagtgtgggcagagtatgccctcaagaggcaggaggctattgcccagaac
aggcgtctgactctggaggatctggaggactcatgggacagagggattcctcgcattaat
accctcttccagaaagaccggcacaccctggcgtacgataaaggctggagggtcaggaca
gacttcaaacagtaccaggttctgaaacagaacccgttttggtggacacaccagcgccat
gatgggaagctctggaacttgaacaactaccgcacggacatgatccaggccctgggtgga
gtggaggggatcttggagcacaccctcttcaaaggaacctacttcccaacctgggagggg
cttttctgggagaaggccagtggctttgaagagtccatgaagtggaagaagttgacaaat
gcccagagatcgggtttgaaccagatccccaacagaagattcaccctctggtggtctcct
accattaacagagccaacgtgtatgtcgggtttcaggtgcaactggatttgacaggtatc
ttcatgcatggcaagatcccaaccctgaagatttccctcattcagatattccgagcccac
ttgtggcagaagatccacgagagcattgtgatggatttgtgtcaagtgtttgatcaggag
ctggacgctctggagatcgagaccgtgcagaaggagaccatccatcccaggaagtcctac
aagatgaactcctcctgtgcagacatcctcctctttgcctcctacaagtggaacgtctca
cggccatcgctgcttgcagactccaaggatgtgatggacagcaccaccactcagaaatat
tggatcgacatccagctgcgctggggcgactacgactcccacgacatcgagcgctatgcc
agagccaagttcctggactacaccacggacaacatgagcatctacccctcccccactggt
gtgcttatagcgattgacctggcctataacctgcacagtgcctacgggaactggttccct
gggagcaagcctctgattcagcaggctatggccaagattatgaaggcaaatcctgcgctg
tatgtcctgagggagcggatccgcaaggggctgcagctgtactcctcagagcccacagag
ccctacctctcctcccagaactacggggagctcttctccaaccagatcatctggtttgtg
gatgacaccaatgtgtacagagttaccattcacaagacctttgaagggaatttgaccaca
aagcccatcaacggggccattttcatcttcaatcccaggactgggcagctcttcctgaag
atcatccatacgtctgtgtgggcaggacagaagcgtctgggccagctggccaagtggaag
actgctgaggaagtggctgccctgattcgctccctgcctgttgaggagcagcccaagcag
atcatagtgaccaggaagggcatgctggacccgttggaggtgcacttgctggatttccca
aacattgtgatcaaagggtcagagctgcagctgcccttccaggcctgcctgaaagttgag
aagtttggtgatctcatcttgaaggctactgagccccaaatggttctcttcaacctttat
gatgactggctgaaaaccatctcctcctacacggcattctcacggctcatcctgattctc
cgggcactgcatgtaaacaatgaccgggccaaagtcatcctgaaaccggacaagaccacc
attacagagcctcaccacatctggcccacgcttacagatgaggagtggatcaaggtggag
gtgcagctcaaggacctgatccttgcagactacgggaagaagaacaatgtgaacgtggca
tccctgacgcagtcggagatccgggatattatcctggggatggagatctcggcgccctcc
cagcagagacagcagattgcagagattgagaagcaaaccaaggagcagtcgcagctgaca
gccacacagacccgcactgttaacaagcatggggatgaaatcatcacgtccactactagc
aattacgagactcagaccttctcttccaagaccgagtggcgagtcagagcgatctctgct
gccaatctccacttgagaaccaaccacatctatgtctcgtctgatgacatcaaggaaacc
ggctacacctacatccttcccaagaacgtgttgaagaaattcatctgcatctcagacctg
cgggcccagattgcagggtacctgtatggcgtgagccctccagataatccccaggtgaag
gagatccggtgcattgtcatggtgccccagtggggaactcaccagacggtgcatctccct
ggccagctgccgcaacatgagtatctcaaggaaatggagcctctgggatggattcacacg
caacccaatgagtctcctcagctctcgccgcaggacgtcacgacacatgccaaggtcatg
gctgacaatccctcttgggatggggagaaaaccatcatcattacctgcagttttacccca
ggctcctgtacactgactgcctacaagctgactcccagtggctatgaatggggcaggcag
aacaccgacaaagggaacaaccccaagggctacctgccatcccactatgagagggtgcag
atgttgctgtctgaccgcttccttggcttcttcatggtaccagcacagggatcctggaac
tacaacttcatgggtgttcgtcatgatcccaacatgaagtacgagctgcagctagcaaat
cccaaggagttttaccatgaggtccatcgcccatctcacttcctcaacttcgccttgttg
caggaaggggaggtctactctgcagaccgagaggatctctatgcatag
DBGET
integrated database retrieval system
