Pelodiscus sinensis (Chinese soft-shelled turtle): 102445866
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Entry
102445866 CDS
T02980
Symbol
UPF3B
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03013
Nucleocytoplasmic transport
pss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102445866 (UPF3B)
03015 mRNA surveillance pathway
102445866 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102445866 (UPF3B)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102445866 (UPF3B)
mRNA cycle factors
P-body specific factors
102445866 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
102445866
NCBI-ProteinID:
XP_014425204
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
AREGIYLGPEILVNPGEAPVSLHQVPLVVIRRLPPSLTKEQLEEHLQPLPEHDYFEFFAN
DSSLYPHMFSRAYINFKNQEDIVLFRDRFDGYVFVDHKGQEYAAIVEFAPFQKSAKKKNK
KKDAKTGTIDDDPEYKKFLESYSADDEKLTSTPETLLEEIEARNKELIAKKTTPLLNFLK
NKQRLREEKREERRRRELERKRQREEERRKWKEEERRKRKEAEKLKKVDKCPEKERDKSK
DEPKIKVLLKKPEKDERDMEKKEKFKKLEKENAREEKAAGALSSMSAKRSDGEAKEEKTK
KSEDEYGKDYRDRERDFERERDYERLQREKXEEKEGFEKEKVFRRKEEEVKKEINSLREK
GRKCDLTDFTSNTEKPEKITKEDKKDDAAARRDRIRNKDRPAMQLYQPGARSRSRLCSYE
DIATKSMDQGADKQESETSNTKEEE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gcgcgggaagggatttaccttggtccggaaatactcgttaaccccggagaggcgcctgtc
tcgctccatcaggtaccactggtggtaattcgacgcttgcctcccagtttgacaaaggaa
caactggaagaacatcttcagcctttgccagaacatgactattttgagttcttcgctaat
gattccagtttgtatcctcacatgttttccagagcatacatcaactttaaaaatcaagaa
gacatagtactgttcagggatcgctttgatggttatgtttttgttgatcacaaaggtcag
gagtatgctgccatagtagaatttgcacctttccaaaaatctgcaaaaaagaagaataag
aaaaaagatgccaaaactgggacaattgatgatgacccagaatataagaagtttttggaa
agttacagtgcagatgatgaaaagttaacatcgactccggaaacattactagaggaaata
gaggcaagaaacaaagagttaatagctaaaaagacaactccccttctgaacttcttgaaa
aacaaacagagactgagagaagaaaaaagagaggagaggcgaagaagagaattggaaaga
aaaagacaaagagaagaagaaaggaggaaatggaaagaagaagaaagaaggaaaagaaaa
gaagcagaaaaactgaagaaagttgacaaatgcccagagaaagaaagggataaatcaaag
gacgaaccaaagattaaggtgctacttaagaaaccagagaaagatgaaagagacatggag
aaaaaggagaagttcaagaaactggaaaaagagaatgcgagggaggaaaaggctgctggt
gcactaagcagtatgtcagccaaacgatctgatggagaggctaaagaggaaaaaacaaaa
aaatctgaagatgaatatggaaaagattacagagaccgggagagagactttgaaagagag
agagattatgagagactgcagcgggagaaanctgaggagaaggaaggctttgagaaggaa
aaagtttttagacgaaaagaggaagaggtgaaaaaggagataaattcactccgagagaaa
ggaaggaaatgtgatcttacagactttacaagcaacacagaaaaacctgagaaaataacc
aaagaggacaaaaaagatgatgctgccgccaggagagatcgcatcagaaacaaggatcgc
ccagcaatgcagctataccagccaggagcccgaagtcgaagtagactgtgttcttatgaa
gacattgctacaaagtctatggatcaaggagcagataaacaggagagtgaaaccagtaat
acaaaagaagaggagtga
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