Pelodiscus sinensis (Chinese soft-shelled turtle): 102445930
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Entry
102445930 CDS
T02980
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03082
ATP-dependent chromatin remodeling
pss03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102445930 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102445930 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pss01009
]
102445930 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pss03021
]
102445930 (SMARCB1)
03036 Chromosome and associated proteins [BR:
pss03036
]
102445930 (SMARCB1)
Protein phosphatases and associated proteins [BR:
pss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102445930 (SMARCB1)
Transcription machinery [BR:
pss03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102445930 (SMARCB1)
SWI/SNF complex
102445930 (SMARCB1)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102445930 (SMARCB1)
PBAF complex
102445930 (SMARCB1)
SWI/SNF complex
102445930 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
102445930
NCBI-ProteinID:
XP_006112357
Ensembl:
ENSPSIG00000012384
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MFRGSLYKRYPSLWRRLATVEERKKIVASSHENQRTHSPRRYHGYTTLATSVTLLKASEV
EEILDGNDEKYKAVSISTEPPTYLREQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRM
GRDKKRTFPLCFDDHDPAVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPE
MFSEILCDDLDLNPLTFVPAIASAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLV
DQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTV
EIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtggctccctgtacaagaggtatccctctctctggaggcgactagccacggta
gaagagaggaagaaaatagttgcatcttcacatgagaatcagcggactcacagccccaga
agatatcacggttatacaacactagctactagtgtaactctcctgaaagcctctgaagtg
gaagagatcttggatggaaatgatgagaaatacaaggccgtgtctatcagcacagagcct
cccacttacctcagagagcagaaggcaaaaaggaataaccagtgggtgccaaccctaccc
aacagctctcatcacctggatgctgtgccatgctcaacaaccatcaacagaaatcgcatg
ggcagggataagaagagaaccttcccactctgctttgatgaccatgacccagcagtgatc
catgagaatgcatcccagccagaggttctggttccaatccgactggacatggaaatcgat
gggcaaaaactcagagatgcttttacgtggaacatgaatgaaaagctaatgaccccggag
atgttctcggagattctctgtgatgacctggatttgaatcctctgacctttgtccctgct
attgcctctgcaattcgacagcagattgagtcttacccgacggacagcatcctagaggac
cagtctgatcagcgagttatcattaagctgaatatccatgtgggaaacatttccctggta
gaccaatttgaatgggacatgtcggagaaggagaactccccggagaagtttgcactgaag
ctgtgttcagagcttgggctaggtggggaatttgttaccaccatcgcttacagcattcgg
ggacagttgagctggcatcagaagacttatgccttcagtgagaaccctctgccaaccgta
gagatcgccattcgcaacacaggtgatgctgaccagtggtgccctttgcttgaaacccta
acagacgcagagatggagaagaagatcagagaccaagacagaaacaccaggcgcatgaga
cgtttggccaacactgctccagcctggtaa
DBGET
integrated database retrieval system
